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S7_scaffold_727_curated_4

Organism: S7_Holophaga_63_20_curated

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 12 / 38
Location: 4259..7666

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P0K3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 79.3
  • Coverage: 1134.0
  • Bit_score: 1817
  • Evalue 0.0
  • rbh
mfd; transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 41.4
  • Coverage: 1105.0
  • Bit_score: 784
  • Evalue 3.30e-224
  • rbh
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 42.1
  • Coverage: 1070.0
  • Bit_score: 793
  • Evalue 2.10e-226

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 3408
ATGGAAACCCGTGACCGCGCCGCGCTGAACGATCTCCTGCGCCTGCTGGACGGACCCGCCCAGGCCCTCGGGGCCGAGGGGGCCCGTTTGCGCTGGACGCAGGTGCCGGGCCTCGCACTGATCCTGGCGCGGTGGGCCAACGAGGGCGGGCGCACGCGCATGCTGTGGGTGGATGCCCCCACCGAGGCCGAAGCCCAGGCCCTGGCCCATGACCTGGCGGTGCTGTTGCCCGAGGCGGGCATTGCCTACTTCCCTGGCTTTGCGCCCTTCGCCGGGGGCGAGTCGAGCCCACCGGGGATGGTGCTCAAGGAGCGCCTCTCCACGCTGGTAGGCCTGCTCGAGCGCCGAGTGCAGATCCTCGTAGCCACGCCCCTGGCGGCCCTGGAGCGGCTGCCTCATCCCACCTGGTTCGCCAAACAGACCCTGGCCCTCACCAAGGGCACCGAGGTGCCCCGGGAACTGCTGCTGGAAACCTTGGTGGCCCTGGGCTACCGCCGCACGGATCTGGCCTCGGACCCCGGTGAATTCAGCGCCCGGGGCCTGGTGGTGGACATCTGGCCCGATCACCTAGAGACGCCCCTGCGCATGGAGTTCTTCGGCGATGAGCTGGAAAAGCTCTCACCCTTCGATCCCGATACCCAGCGGCGCACGGGCCAAGACATTCCGACCCTCACGCTCTACCCCCGCTTCGAGGGCGCCAAGGGCAGCGGCACGGCCCTGCTGGAGGCCGTGCAGTCCCGGGCCGCCCAAACCACCGACCCCGAGGACGACCTCAGCTTCCGCAAGGCCCGCCTCGCCACCCACGGTCACTTCCCCGGCGAGGAACTCTTCTACCCGCTGCTGGATCAACCCAAGGGCCAGCTCACCCACTGGGTGCCGCCCTGCCTGCGGGTGCGGCTCGAAGGCGAGTGGGCCACTGCCCTGCGGGATACGGAGAAGGGCCGCATCGATGCGGCCCTGGAGATCCTGCGGCGGGGAGGCGTGGTGTGCCCCGACTTCGAGGATCGCTATCTCGACGCCGATCCCAGCCGCACCACCCTGCTGCTCACGGAGTGGCAGGCGGAGGCCTCCCTGCCCTTCACCGCCCAGCCCGCCCGGGAATTTCAGGGGCGTCTGAGTGAACTCAAGGCCTACCTGCAGGAATTGACGGACACGGGGCACCGCGTGTTCCTGGCGGGTTCCACCCCGGGCATGCGGGATCGCCTGGGCGAGATGATCGCCGAGTACGAGCTGCCCGTAGCCCACGGCACCGAGGCTGGCTGCCGGGCGATTCAGCTCACCCTCTCCGCGGGCGTCTACCTCAAGGAAGCCCAGGTGCTGCTCCTCACGGAGCGCGAGGTCTTCGGCCGCAAGGCCATCCCGTCGAAACCCCAGAAGAGCCGCACGGCGGCCTTCCTCTCGGACCTGAAGGATCTCAAGGTCGGGGATCGCATCGTCCACATGGATCACGGCATCGGCGAATTCCTCGGCCTCGGCACCCTCACCGTGGGCGGCGAGGAACACGAGGTCGTGCAGCTGCGCTATGCCGATAACGGCCGCGTGAACGTGAGCCTGGAGCGGGCGGATCTCATCCAGCGCTATGTGTCCCCCGATGGCACCCAGCCGCCCCTGGACAAGCTCGGGGGCGCCGCCTGGGCCAAGGTGAAGCGCCGGGCCAAGAAGGCCATCCGCGACATGGCGGAGGAACTGCTGAAGCTCTACGCCAAGCGCAAGCTGGAGAAGGGCCATGCCTACGCCGTGGACGGCCCGGAGATGGCGGAGTTCGAGGCCACCTTCCCCTACGATCCCACCCCCGATCAGATCGAAGCCATCGAGGCGGTGAAGGCCGACCTGGAGTCCCCCAAGCCCATGGATCGCCTGCTGGTGGGCGACGTGGGCTACGGCAAGACGGAAGTGGCCATGCGCGCCGCCGCCAAGGCCGCCCTGGACGGCAAGCAGGTGGCCATCCTCTGCCCCACCACCGTGCTCTGCTTCCAGCACTTCCGCACCTTCAAGGAACGCTTCGCGGGCTTTCCCATCCGCATCGAGATGATCAATCGCTTCGTGGATGCCAAGGAGGGGAAGCAGATCCTGGAAGACGTGGCCGACGGCAAGGTGGAGATCCTCATCGGTACCCACCAGCTTCTGGGCGCCCGCACCAAGTTCCACGATCTCGGCCTGGTGGTCATCGACGAAGAGCAGCGCTTCGGCGTGGTACACAAGGAGAAGCTGAAGAAGTTCCGGGCCAACGTGGAGGTGCTGGCCATGAGCGCCACGCCCATCCCCCGCACCCTGCACATGAGTCTCACGGGGCTGCGGGAGATCTCGCTCATCGAGACGCCTCCCAAGAACCGCCTAGCCATCGAGACCGTGGTGGCGCCTTGGTCGGACGAGCTGATCGCCAGCGCCATCCAGTTCGAGCTGCGCCGGGGCGGGCAGGTCTACCTGGTGCACAACCGCGTGGAGAGCATCGTCAGCATCGCCGAGCACATCCGCACCCTGGTGCCCGATGCCCGGGTGGGCGTGGGCCACGCCCAGCTCTCGGACGAGGCGCTGGAGAACGTGATGCTGGGCTTCATGGAAGGCCGCATCGATGTGCTGGTGTCGACAACCATTGTCGAGAATGGCCTAGACGTGCCCAATGCCAACACCCTCATCGTCCATCGCGCCGATAAGTTCGGCCTCAGCCAGCTCTATCAGCTGCGGGGCCGAGTGGGTCGCAGCGATGTGCCTGCCTACGCCTACCTGCTGATCCCTGGCAAGGGCGAGATCACCGAGGACGCCCGCAAGCGCCTGCAGGCCCTGGAGGACTTCTCGGAGCTGGGCTCAGGGTTCCGGGTGGCGGCCATGGACCTGGAACTGCGGGGCGCGGGCAACCTGCTGGGGGGCGAGCAGTCGGGCCACATCCACGACATCGGCTTCGAGCTCTACATCCGCCTGCTGGAGGAGACCCTCCAGGAACTCCAGGGCCAGGCCTCCGGCACCTTCGAGGTCAAGATCGAACTGGGCCCCGCGCAGCTGGGCCGCCGCTGGATCGACCAGGCCGCCGAGCGTCTCGTGGCTTACAAGCGCGCCAGTCGCCTGAAGACCGAGCGGGATCTGGAACTGTACCGGCTGGAACTGGAGGATCGTTTCGGTCAAGTGCCCCAAGACGACGAAGACAGCGCCCGCTTCTTCGAACTGCTCAAGGTCAAGCTCCGCGCCCAGGCCATCGCCGTGAGCGAAGTGACCCTGGACAAGGGCCGTCTCAAGCTGCGGGTGAGCCCCCAGACGCCCCTGGATCCCACCAAACTCATGGCCTGGACCCGCACCCAGAAGGATGCCCAGCTCACCCCGGACGGCTCCGTGCTCCTTCCCATCCAGGGCCACGAATACGGCGCCATCCACCTGGCCCAGCGGGTGCTGGAGGAATGGGCGGGGATGGTTTAA
PROTEIN sequence
Length: 1136
METRDRAALNDLLRLLDGPAQALGAEGARLRWTQVPGLALILARWANEGGRTRMLWVDAPTEAEAQALAHDLAVLLPEAGIAYFPGFAPFAGGESSPPGMVLKERLSTLVGLLERRVQILVATPLAALERLPHPTWFAKQTLALTKGTEVPRELLLETLVALGYRRTDLASDPGEFSARGLVVDIWPDHLETPLRMEFFGDELEKLSPFDPDTQRRTGQDIPTLTLYPRFEGAKGSGTALLEAVQSRAAQTTDPEDDLSFRKARLATHGHFPGEELFYPLLDQPKGQLTHWVPPCLRVRLEGEWATALRDTEKGRIDAALEILRRGGVVCPDFEDRYLDADPSRTTLLLTEWQAEASLPFTAQPAREFQGRLSELKAYLQELTDTGHRVFLAGSTPGMRDRLGEMIAEYELPVAHGTEAGCRAIQLTLSAGVYLKEAQVLLLTEREVFGRKAIPSKPQKSRTAAFLSDLKDLKVGDRIVHMDHGIGEFLGLGTLTVGGEEHEVVQLRYADNGRVNVSLERADLIQRYVSPDGTQPPLDKLGGAAWAKVKRRAKKAIRDMAEELLKLYAKRKLEKGHAYAVDGPEMAEFEATFPYDPTPDQIEAIEAVKADLESPKPMDRLLVGDVGYGKTEVAMRAAAKAALDGKQVAILCPTTVLCFQHFRTFKERFAGFPIRIEMINRFVDAKEGKQILEDVADGKVEILIGTHQLLGARTKFHDLGLVVIDEEQRFGVVHKEKLKKFRANVEVLAMSATPIPRTLHMSLTGLREISLIETPPKNRLAIETVVAPWSDELIASAIQFELRRGGQVYLVHNRVESIVSIAEHIRTLVPDARVGVGHAQLSDEALENVMLGFMEGRIDVLVSTTIVENGLDVPNANTLIVHRADKFGLSQLYQLRGRVGRSDVPAYAYLLIPGKGEITEDARKRLQALEDFSELGSGFRVAAMDLELRGAGNLLGGEQSGHIHDIGFELYIRLLEETLQELQGQASGTFEVKIELGPAQLGRRWIDQAAERLVAYKRASRLKTERDLELYRLELEDRFGQVPQDDEDSARFFELLKVKLRAQAIAVSEVTLDKGRLKLRVSPQTPLDPTKLMAWTRTQKDAQLTPDGSVLLPIQGHEYGAIHLAQRVLEEWAGMV*