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S10_scaffold_7644_curated_3

Organism: S10_Methanosarcina_barkeri_39_9_curated

near complete RP 31 / 55 MC: 5 BSCG 21 / 51 ASCG 34 / 38 MC: 2
Location: 1732..2184

Top 3 Functional Annotations

Value Algorithm Source
tRNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.0
  • Coverage: 151.0
  • Bit_score: 285
  • Evalue 3.20e-74
tRNA-splicing ligase RtcB n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46D26_METBF similarity UNIREF
DB: UNIREF100
  • Identity: 94.0
  • Coverage: 151.0
  • Bit_score: 282
  • Evalue 1.50e-73
RNA-2',3'-PO4:RNA-5'-OH ligase similarity KEGG
DB: KEGG
  • Identity: 95.4
  • Coverage: 151.0
  • Bit_score: 283
  • Evalue 2.50e-74

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Taxonomy

Methanosarcina barkeri → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 453
ATGGTAGAAAGTGAAGATACAACTATCGAAGAATTAAGCACGGAAAATACACAGGAGGATGTAAAGGGTATGGTCAGGAAGCTTTCCGAGAACGAATGGGAGATTCCTGTCGGACACATCCCGAACATGCGAGTTCCGGGCCGTCTGTTTGTATCCGAAAGTTTACTTGAAGGCATTGACCCAGGGACTATTGACCAGATTGCAAATGTAGCAACCCTCCCTGGCATTCAGAAGTACTCTATGGCAATGCCTGATGCTCATCTTGGCTATGGCTTTGCTATAGGAGGAGTTGCCGCTTTTGATGTAGAAGAAGGAATTATTAGCCCTGGTGGGGTTGGTTTTGATATCAACTGCGGAGTAAGGCTTATTCGTACTAACCTTCAGAAAGAAGnnnnnnnnCCGAATATAAATAGATTAACTGACGAACTTTTTAGTAATGTACCTGCTGGTGTT
PROTEIN sequence
Length: 151
MVESEDTTIEELSTENTQEDVKGMVRKLSENEWEIPVGHIPNMRVPGRLFVSESLLEGIDPGTIDQIANVATLPGIQKYSMAMPDAHLGYGFAIGGVAAFDVEEGIISPGGVGFDINCGVRLIRTNLQKEXXXPNINRLTDELFSNVPAGV