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S10_scaffold_1632_curated_4

Organism: S10_Methanosarcina_barkeri_39_9_curated

near complete RP 31 / 55 MC: 5 BSCG 21 / 51 ASCG 34 / 38 MC: 2
Location: comp(3383..4348)

Top 3 Functional Annotations

Value Algorithm Source
Geranylfarnesyl diphosphate synthase {ECO:0000313|EMBL:AKB82612.1}; EC=2.5.1.1 {ECO:0000313|EMBL:AKB82612.1};; EC=2.5.1.10 {ECO:0000313|EMBL:AKB82612.1};; EC=2.5.1.29 {ECO:0000313|EMBL:AKB82612.1};; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.1
  • Coverage: 321.0
  • Bit_score: 614
  • Evalue 6.40e-173
Geranylfarnesyl diphosphate synthase (EC:2.5.1.10 2.5.1.1 2.5.1.29) similarity KEGG
DB: KEGG
  • Identity: 96.0
  • Coverage: 321.0
  • Bit_score: 608
  • Evalue 7.10e-172
Farnesyl-diphosphate synthase / geranylgeranyl-diphosphate synthase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46CL6_METBF similarity UNIREF
DB: UNIREF100
  • Identity: 94.1
  • Coverage: 321.0
  • Bit_score: 599
  • Evalue 1.20e-168
  • rbh

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Taxonomy

Methanosarcina barkeri → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 966
ATGACGTTAGTTGATGAGATCAAAAAAAGAAGTGTCCATGTTGACGCCGCAATTGATGAACTGCTTCCGGTAGCTCATCCAGAGGAATTATATAAAGCCTCTCGCTACCTGGTAGATGCAGGAGGAAAGCGTCTCCGTCCTGCCGTTCTCATTCTGGTAGCCGAAGCAACGGGCTCTGACCTTAAATCGGTTTTACCTGCAGCTGTGGCCGTGGAGCTTGTACATAATTTCACTCTGATCCATGATGACATAATGGACAAGGATGATGTCCGCAGAGGGAGACCTGCAGTCCATATGATATGGGGTGAAGCCGGAGCAATTCTTGCAGGTGATACACTTTATTCCAAAGCCTTTTCGATTCTGTCAAAAGTCCAAAACGAGCCTTCAAGGATTTTAAAATGTATGGATATCCTTTCAAAAACCTGTACCGAAATTTGTGAAGGCCAGTGGCTTGACATGGATTTTGAAAAGAGGGAAAAGGTTAGTAAAGCTGAATATATTGAGATGGTGGAAAAGAAGACATCAGTCCTTTATGCAGCTGCAGCCAAGATCGGGGCTCTTCTTGGAGGTGCTTCTGATGAGACTGCTGAAGCCTTATCCGAGTATGGACGCCTTATAGGGATTGGGTTCCAGATGTATGACGACGTTCTGGATATGGTCACTCCTCAGGAAGTGCTCGGTAAGGTAAGAGGCAGTGACCTTATGGAAGGAAAACACACCCTTATCATAATCGATGCTTTTGAAAAAGGCGTGAAACTGGACATTTTCGGAAAAGGGGAAGCTACTCAGGAAGAAACCGATGAAGCTGTCCGGACTTTAACCGAATGCGGATCAATTGATTATGTAAAGAACCTTGCAATTTCATATATCAACGAAGGCAAAGCAAAACTGGACGCCCTGCAGGACTGTCCTGAGAAAGAACTTCTCCTTCAGATTGCCGATTACATGATCTCAAGGAAATACTGA
PROTEIN sequence
Length: 322
MTLVDEIKKRSVHVDAAIDELLPVAHPEELYKASRYLVDAGGKRLRPAVLILVAEATGSDLKSVLPAAVAVELVHNFTLIHDDIMDKDDVRRGRPAVHMIWGEAGAILAGDTLYSKAFSILSKVQNEPSRILKCMDILSKTCTEICEGQWLDMDFEKREKVSKAEYIEMVEKKTSVLYAAAAKIGALLGGASDETAEALSEYGRLIGIGFQMYDDVLDMVTPQEVLGKVRGSDLMEGKHTLIIIDAFEKGVKLDIFGKGEATQEETDEAVRTLTECGSIDYVKNLAISYINEGKAKLDALQDCPEKELLLQIADYMISRKY*