ggKbase home page

S10_scaffold_3288_curated_3

Organism: S10_Methanosarcina_barkeri_39_9_curated

near complete RP 31 / 55 MC: 5 BSCG 21 / 51 ASCG 34 / 38 MC: 2
Location: 2509..3042

Top 3 Functional Annotations

Value Algorithm Source
tRNA (cytidine(56)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00077}; EC=2.1.1.206 {ECO:0000256|HAMAP-Rule:MF_00077};; tRNA ribose 2'-O-methyltransferase aTrm56 {ECO:0000256|HAMAP-Rule:MF_00077}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.3
  • Coverage: 176.0
  • Bit_score: 350
  • Evalue 1.20e-93
tRNA (cytidine(56)-2'-O)-methyltransferase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=TRM56_METBF similarity UNIREF
DB: UNIREF100
  • Identity: 92.7
  • Coverage: 177.0
  • Bit_score: 335
  • Evalue 2.30e-89
  • rbh
tRNA cytosine methylase Pos56 similarity KEGG
DB: KEGG
  • Identity: 92.7
  • Coverage: 177.0
  • Bit_score: 336
  • Evalue 3.70e-90

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methanosarcina barkeri → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 534
ATGAAAAAAATTGTTTTGCTGCGCCTGGGGCATCGCCCTGAAAGGGATAAAAGAATCACAACCCACGTGGGCTTAACTGCCCGGCTGCTCGGTGCAGAAGGTATGCTCCTTGCCTCGAATGATCCAGGAATAGTAGAAACTCTTGAGGATGTTGTCAGGCGCTGGGGCGGAGATTTCTATATTAAGAACAATGTCAATTATAAGCAGGAAATCAAGGAATGGAAAGCTGCCGATGGAAAAGTTTGCCACCTTTCAATGTATGGAGTTAATCTTCCCGATGTCACGGACGAGCTTAAAAGTTGTGACAGGCTTATGATCGTCGTAGGAGCAGAAAAGGTTCCTCCGGAAATTTATCAGCTTGCGGACTGGAATGTTGCAGTTGGAAGCCAGCCCCATTCCGAGGTTGCAGCAGTTGCAATCACTATGGACAGGATTGCAGATGACGAACCGCTTGAAAGGGAATTCCCAAATGCCGAGCTGACAATTGTGCCAGCAGAAAGAGGTAAACAGGTTATAGAAAATTCCAGGGATTAA
PROTEIN sequence
Length: 178
MKKIVLLRLGHRPERDKRITTHVGLTARLLGAEGMLLASNDPGIVETLEDVVRRWGGDFYIKNNVNYKQEIKEWKAADGKVCHLSMYGVNLPDVTDELKSCDRLMIVVGAEKVPPEIYQLADWNVAVGSQPHSEVAAVAITMDRIADDEPLEREFPNAELTIVPAERGKQVIENSRD*