ggKbase home page

S10_scaffold_1479_curated_4

Organism: S10_Methanosarcina_barkeri_39_9_curated

near complete RP 31 / 55 MC: 5 BSCG 21 / 51 ASCG 34 / 38 MC: 2
Location: 3770..4006

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit H {ECO:0000256|HAMAP-Rule:MF_00025}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00025};; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.4
  • Coverage: 78.0
  • Bit_score: 150
  • Evalue 8.30e-34
DNA-directed RNA polymerase subunit H (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 96.2
  • Coverage: 78.0
  • Bit_score: 148
  • Evalue 4.90e-34
DNA-directed RNA polymerase subunit H n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=RPOH_METBF similarity UNIREF
DB: UNIREF100
  • Identity: 96.2
  • Coverage: 78.0
  • Bit_score: 146
  • Evalue 6.50e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methanosarcina barkeri → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 237
TTGACAAAATTCAGCCTGCTCGACCATGAGTCGGTCCCTAAACATGAAATCATGCCTGAAGGCGAGTTAAAGTCTGTTTTAAGCAAGTATTCCATTGAAAAGGAACAACTTCCGAAAATCAAAGTGCAAGATCCTGTTAGTAAAGAAATCGGAGCTGTTGTCGGAGACGTAGTGAAAATCACAAGAAAAAGTCAAACTGCAGGGGAGGCAGAGTATTACAGACTTGTGATCGAGTAA
PROTEIN sequence
Length: 79
LTKFSLLDHESVPKHEIMPEGELKSVLSKYSIEKEQLPKIKVQDPVSKEIGAVVGDVVKITRKSQTAGEAEYYRLVIE*