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S10_scaffold_1479_curated_5

Organism: S10_Methanosarcina_barkeri_39_9_curated

near complete RP 31 / 55 MC: 5 BSCG 21 / 51 ASCG 34 / 38 MC: 2
Location: 4217..5812

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit B {ECO:0000313|EMBL:AKB81989.1}; EC=2.7.7.6 {ECO:0000313|EMBL:AKB81989.1};; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.4
  • Coverage: 531.0
  • Bit_score: 1030
  • Evalue 0.0
DNA-directed RNA polymerase subunit B'' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 96.0
  • Coverage: 531.0
  • Bit_score: 1019
  • Evalue 2.90e-295
DNA-directed RNA polymerase, subunit B n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q464Y5_METBF similarity UNIREF
DB: UNIREF100
  • Identity: 95.9
  • Coverage: 531.0
  • Bit_score: 1017
  • Evalue 3.00e-294
  • rbh

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Taxonomy

Methanosarcina barkeri → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1596
GTGCAGCACCATATAGACTCATTTAACAAGTTTATAGATTACGGGCTGCAAAAAATAATAGATGAACAGAGAATAATAGAAACCGATATCGAGGATACCTACCTCAAACTAGGCAAGATAAGGGTAGAACATCCTGTGGTAAAGGAAGCCGACGGGGCAATCGAAAAACTTTATCCCAACGAAGCAAGGCTCAGGAACCTCTCGTACTCAGGTCCTCTATACCTCGAAATGAGCGTGGTAAAGGACGGAGGTGAGTCCGAAGTAATGGAAGCAAAAATAGGACAGCTTCCCGTCATGATCAAGTCCAAGATCTGTAACCTTCCAGGGCTTAGCGAAACTGAAAAAATCCGTTATGGGGAAGATCCGCTTGATCCTGGAGGATATTTCATTATAGGTGGTACCGAAAGAGTGGTTATGACCCTTGAAGACCTCGCTCCTAACAAAATTCTTGTAGAATATGGGGAAAGGTACGGTGACACTATAGAGGTTGCGAAGGTTTTCTCACAGAAACGCGGATACAGAGCCCTTGTAATCGTAGAAAGAGGAAGAAAATCCCTGCTCGAAGTTTCCTTCCCTTCGATCTCAGGCCGCGTGTTCTTTATTACTCTTATGAGAGCTCTTGGGATCGTAACTGACGAAGACATTGTAAATGCAGTTTCAAGTGATCCCGAAATTATAAAATTCATGCTGGAGAACCTTGAAGAAGCCGAAGTTGAAACCCAGGAAGAAGCAATCGAGAAAATCGGAGCCAGGGTTGCTGCAGGTCAGGCAAAAGAATACCAGATAAAAAGAGCAAACTATGTTATTGACAGGTACCTGTTCCCTCATCTTGGAAATGACATGAGAGACAGGATCTCCAAAGCTCACTTCCTAGCAAGAATGGCTGAGTCATGTTTCGAACTGGCCCTTGGCAAGCGTTCGGAAGACGACAAAGACCACTATGCAAACAAAAGGCTGAAACTTGCAGGAGACTTGATGGAAGATCTCTTCAGGGTATCATTCAACAGGCTTGCAAGAGACATAAAATACCAGCTCGAACGCGCAAACATGAGAAATCGAGAACTTAACGTTGCTACAATAGTCAGGGCTGACGTATTGACTGACCGCTTGCAACACCCGCTGGCAACCGGAAACTGGGTTGGAGGAAGAACAGGTGTGTCTCAGCTCCTTGACAGAAACGACTACATCTCTACTCTTTCCCATCTGCGCCGGGTAATTTCGCCCCTTTCACGAGCCCAGCCTCACTTTGAGGCCAGAGACCTGCACGCAACCCAATGGGGAAGGCTCTGTCCATCGGAAACTCCTGAAGGCCCAAACTGTGGCCTGGTGAAAAACTTTGCCGAGATGGTTGAACTTTCAACAGGTATAGAAGATACCGAAGGGATAAAGAAAATCCTCCATGACTTAAACGTCGAGCGTGTGGTTGTAAAGGTACCTGAACTCCCGGCCAAAATAAAAGAAACCTTATTCGATGAGTTCGGAGAAGAAATTGTTGAAGAATATGAAGAAACTCCGGAACCCGAAACCAAATACAAAGATGATGATTTTTACGATTATTCAGACATGGACGATGCCGGATCAACGTTCGGTGATTGA
PROTEIN sequence
Length: 532
VQHHIDSFNKFIDYGLQKIIDEQRIIETDIEDTYLKLGKIRVEHPVVKEADGAIEKLYPNEARLRNLSYSGPLYLEMSVVKDGGESEVMEAKIGQLPVMIKSKICNLPGLSETEKIRYGEDPLDPGGYFIIGGTERVVMTLEDLAPNKILVEYGERYGDTIEVAKVFSQKRGYRALVIVERGRKSLLEVSFPSISGRVFFITLMRALGIVTDEDIVNAVSSDPEIIKFMLENLEEAEVETQEEAIEKIGARVAAGQAKEYQIKRANYVIDRYLFPHLGNDMRDRISKAHFLARMAESCFELALGKRSEDDKDHYANKRLKLAGDLMEDLFRVSFNRLARDIKYQLERANMRNRELNVATIVRADVLTDRLQHPLATGNWVGGRTGVSQLLDRNDYISTLSHLRRVISPLSRAQPHFEARDLHATQWGRLCPSETPEGPNCGLVKNFAEMVELSTGIEDTEGIKKILHDLNVERVVVKVPELPAKIKETLFDEFGEEIVEEYEETPEPETKYKDDDFYDYSDMDDAGSTFGD*