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S10_scaffold_1479_curated_6

Organism: S10_Methanosarcina_barkeri_39_9_curated

near complete RP 31 / 55 MC: 5 BSCG 21 / 51 ASCG 34 / 38 MC: 2
Location: 5827..10296

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.5
  • Coverage: 880.0
  • Bit_score: 1749
  • Evalue 0.0
DNA-directed RNA polymerase subunit A' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 97.7
  • Coverage: 880.0
  • Bit_score: 1737
  • Evalue 0.0
DNA-directed RNA polymerase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q464Y7_METBF similarity UNIREF
DB: UNIREF100
  • Identity: 97.6
  • Coverage: 880.0
  • Bit_score: 1735
  • Evalue 0.0
  • rbh

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Taxonomy

Methanosarcina barkeri → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 4470
ATGACTAAAGCAAAAGTATTCATAAATGGGGAGCTTGTCGGGACCCATGATAACCCTACGGAGCTTGCAGACGAGCTAAGAAGGATGAGGCGGCAGGGGTTCATATCCAGACAGGTCAATGTCGCTCTTAACAACAACACAAGAGAAGTAATTATAAACTCCGATATGGGCAGAGCAAGAAGACCACTTTTAGTTGTGGAGAACGGACTTCCCAGGGTAACTGAAGAGCATGTAGAGAAAATTAGGAACAAAGAAATCAACTTTGATGACCTGGTAAAAGAAGGCTGTATAGAGTATCTTGATGCCGAAGAAGAGGAAAATGCCTATATCGGACTCTATGAGGCTGACCTTACTCCAGATCACACTCACATGGAGATTGATCCTGAACTTATTTTAGGAATCTCTACCGGAATGGTTCCTTATCCTGAACATAATGCCTCTCCGCGTAATACCATGGGCGCAGCCATGATTAAGCAGTGTATCGGAGTTGCAACTGCAAACCAGAAGCTCAGACCTGATACCCGAGCCCATGTGCTCCACTATCCTCAGAGGGCAATGACCAAGACAAGAACCTCGCAAGCAATAGGTTTTGACGACAGACCTGCAGGTCAGAACTTCGTTGTCGCAATCCTGTCCTATGAAGGGTATAACATTGAAGACGCCCTGATTTTCAATAATGGCTCAATAGAAAGAGGCCTCGGAAGAAGCCACTTTCTCAGAACTTTCGAAGGAGAAGAACGAAGATATCCGGGTGGGCAGGAAGATAAGTTCGAGATTCCTGACTCAGAATATCGTGGAGCACGCAGTGCAGAAGCCTATGCGAACCTGGATACGGACGGGCTTGTAAATCCCGAAACCCCGGTTGGCCCCAATGACGTGCTTATCGGAAAAACCAGTCCGCCAAGGTTCCTTGAAGAACCGTCGGACTTCGGGATTGCAGTCGAGCAGAGGAGAGAAAGCTCGATCACAATGCGGTCAAATGAAACCGGAATTGTTGACACGGTCATCTTGACAGAATCCATTAATGGGACCAGGCTTGCCAAAGTAAAGGTAAGGGATGAAAGGATTCCTGACATTGGGGACAAATTCGCCTCAAGGCACGGGCAAAAAGGAGTTATCGGCCTGAAAGTCCCGATTGCCGATATGCCTTTTACGGAATCAGGCCTTACTCCGGACCTGATGATCAACCCGCATGCAATTCCTTCCCGTATGACTGTAGGCCACGTCCTTGAAATGATTGGCGGAAAAGTAGGTTCCATGGAAGGAAGAAGAGTCAATGCAACAGCTTTCTCCGGAGAAAATGAAGAAGATCTCAGAGAAGCCCTGAAAAAGCATGGGTTTGCCCATACTGGAAAAGAAATTTTCTATGATGGAGCAACCGGCAAGATGATTCCTGCAGATGTCTTTGTTGGGGTTATTCTCTACCAGAAACTGCACCATATGGTCACTTCAAAGATGCATGCGCGGTCTCGCGGACCTGTACAGGTGCTTACCCGCCAGCCAACCGAAGGCCGAGCCAGAGAAGGTGGTCTCAGATTCGGAGAAATGGAACGTGATGTGCTGGTAGGGCACGGAGCTGCCATGTCGCTAAAAGAAAGGCTGCTCGATGAATCGGACAAAGTTGTGGAACTTGTCTGTTCTCACTGCGGAATGATTGCAACATATGACAAGCAGCGAAATGTCGCTTTTTGCTCAACCTGTGGAGCTGACACGGATATATATCCTGTTGAGATGAGCTATGCATTCAAGTTGCTGCTGGACGAAATCAAATCTCTGGGAGTTGCTCCCAGGCTTAAACTTGAAGAnnnnnnnnnnnnnnAGGCAGATATGGCAAATGTACCTCCTATTCCGAAAAGAATTGCTTCTATTAAATTCGGACTACTGTCTCCAAAAGAGATCCGTAAAATGAGTTCGACCCCGATCATCACAGCTGATACTTATGATGATGACGGGTTTCCAATTGACATGGGACTTATGGACACAAGACTCGGAGTCATTGACCCCGGTCTTCGCTGCAAAACCTGTTCAGGGAGAGCAGGCGAGTGTCCTGGACACTTCGGGCATATTGAGCTTGTAGCTCCGGTAGTTCATGTTGGTTTTAATAAAGTAATCCGAAAACTACTCAGGGCAACCTGCAGGAAATGCAGCAGGCTCTTGCTTGACCCTGCACAGAAACAGCACTTTCTGGACCAGCTTATAGGCATTGAGGAAATCGGACATATGCCCGATGACATGATTAACGAGGCTTATAAGGAAGCTAGCAAAGTAAAGACCTGCCCCTACTGCAACGAGGAACAGCTGGAAATAAAATTCGAAAAACCCAGCGAGTATCTCGAAAACGGGGAGAAATTAACCCCTACCGAGATAAGGGACCGTTTCGAGAATATCCCTGATGACGATATTCGGGTTATCGGAATGGACCCAAAGAACGCAAGGCCTGAATGGATGATCCTTACGGTCCTGCCCGTACCTCCTGTTACGGTTCGTCCTTCGATTACCCTTGAATCCGGGCAGCGCAGTGAAGACGACCTGACCCATAAACTCGTAGATATTATCAGAATTAACCAGCGCTTCCAGGAAAACAGGGAAGCTGGCGCTCCCCAGCTCATTATTGAGGACCTCTGGGAGCTCCTTCAGTACCACGTTACAACCTTCTTTGACAATTCAGTCTCAGGAATACCTCCTGCAAGACACAGGTCAGGAAGGCCATTAAAGACCCTATCCCAACGTTTGAAGGGTAAGGAAGGGCGTTTCAGAGGAAGTCTATCAGGTAAGCGTGTTAACTTCTCTGCACGTACGGTAATCTCTCCTGACCCGAACCTGAGCATTAATGAGGTAGGGGTTCCAATGCCTATTGCACGGACCCTGACAATGCCCTCAGTAGTAACACCAAGGAATGTAGAACAGCTTAAGATTTACGTGCGTAACGGAGAGGATGTGCACCCCGGTGCAAATTACGTACTGCGTCCTGACGGCAGGCGCATAAAAGTTACAAATGTAAACAAAGACGACCTTGCAGAAAAGCTGGAATTCGGATGGGTAGTGGAACGTCAGTTAAAGGACGGAGATATTGTACTTTTTAACAGGCAGCCATCTCTTCACAAGATGAGTATTATGGCTCATTCTGTGAAAGTACTTCCGAATAAGACCTTCAGGCTGAATCCTGCTGTATGTCCTCCATATAACGCTGACTTTGATGGGGACGAGATGAACATGCATGCCCTTCAGACCGAAGAGTCCAGGGCTGAGGCAAAAGTCCTGATGCAGGTTCAGGAAAATATTCTTTCCCCACGTTTCGGAGGTCCTATTATAGGTGGGATCCATGACCATATTTCAGGGCTTTTCCTGCTTACACGTTTTGAGAATCATATCTTAGCCGATGACGCTTACGATATGCTCCGGAAAAGCGATATTAAAGAGTTGCCTTCCCCTGCAGGGTACGATTCCGACGGAAAGCCCTACTGGACAGGAAAACAAATCTTCAGCCAGATCCTGCCCAAAAATCTTAATGCACAGTTTTCAGCCCAGGTCTGCTCGCACTGTGATACCTGTAAGAAAGAGGAGTGTCCAAACGATGCCTATGTGGTAATCCAGGACGGAGAACTCATTGCAGGTACAATAGATGAGGCGGCCATCGGAGCATTCAAAGGAAAAGTTCAGGATCGTATTATCAAGGAAATTGGCCCTGAAGCCGGAGCTCGCTTTATAGACAATATGACCATGCTTGCAGTTAGGGCTATCATGCGGACAGGCCTGAGTTTCGGAATAGCTGATGAAGATATTCCGAAAGAAGCAAGGATCCAGATCAATGAAGTCCTTAACAAAGCTGAAGATGCTGTGCAAAACCTTATCAAGTCTTACCAGAATAAAGAGCTTGAACCCCTTCCTGGAAGAACCCTTGACGAGACAATTGAAATGAGCATTATGCAGAAGCTCGGAAAGGCCAGGGACGAGACCGGTAACATAGCAGACAGCCATATGGGGCTTGAAAACTCGGCAGTTATTATGGCCCGCTCAGGGGCCAGAGGTTCCATCCTGAACCTTACTCAGATGGCAGCTTGTGTTGGCCAGCAGGCCGTGCGTGGAGAACGTATCCGCAGAGGATATGCAGGCAGGACATTACCCCATTTCCAGAAGGGAGATCTTGGTTCGGACGCCCACGGATTCGTAAAGGCAAGCTACAAGAGCGGGCTTAACCCGACTGAATATTTCTTCCATGCAATCGGTGGTAGGGAAGGTCTTGTGGACACTGCAGTCAGGACATCACAATCAGGGTACCTGCAGAGAAGGCTTGTCAATGCTCTCCAGGACCTGGAGGTCCAGTATGACCTTACAGTCAGGGATACCAGAGGCGTGCTTGTACAATTTAAATTTGGAGAAGATGGAATTAACCCTACAAAAAGCGATTTCAGCAAACCGGATACAATCCACAGGATTGTCAATTCCGTAGCAAACCGGGAGGTGGCCTGA
PROTEIN sequence
Length: 1490
MTKAKVFINGELVGTHDNPTELADELRRMRRQGFISRQVNVALNNNTREVIINSDMGRARRPLLVVENGLPRVTEEHVEKIRNKEINFDDLVKEGCIEYLDAEEEENAYIGLYEADLTPDHTHMEIDPELILGISTGMVPYPEHNASPRNTMGAAMIKQCIGVATANQKLRPDTRAHVLHYPQRAMTKTRTSQAIGFDDRPAGQNFVVAILSYEGYNIEDALIFNNGSIERGLGRSHFLRTFEGEERRYPGGQEDKFEIPDSEYRGARSAEAYANLDTDGLVNPETPVGPNDVLIGKTSPPRFLEEPSDFGIAVEQRRESSITMRSNETGIVDTVILTESINGTRLAKVKVRDERIPDIGDKFASRHGQKGVIGLKVPIADMPFTESGLTPDLMINPHAIPSRMTVGHVLEMIGGKVGSMEGRRVNATAFSGENEEDLREALKKHGFAHTGKEIFYDGATGKMIPADVFVGVILYQKLHHMVTSKMHARSRGPVQVLTRQPTEGRAREGGLRFGEMERDVLVGHGAAMSLKERLLDESDKVVELVCSHCGMIATYDKQRNVAFCSTCGADTDIYPVEMSYAFKLLLDEIKSLGVAPRLKLEXXXXXXADMANVPPIPKRIASIKFGLLSPKEIRKMSSTPIITADTYDDDGFPIDMGLMDTRLGVIDPGLRCKTCSGRAGECPGHFGHIELVAPVVHVGFNKVIRKLLRATCRKCSRLLLDPAQKQHFLDQLIGIEEIGHMPDDMINEAYKEASKVKTCPYCNEEQLEIKFEKPSEYLENGEKLTPTEIRDRFENIPDDDIRVIGMDPKNARPEWMILTVLPVPPVTVRPSITLESGQRSEDDLTHKLVDIIRINQRFQENREAGAPQLIIEDLWELLQYHVTTFFDNSVSGIPPARHRSGRPLKTLSQRLKGKEGRFRGSLSGKRVNFSARTVISPDPNLSINEVGVPMPIARTLTMPSVVTPRNVEQLKIYVRNGEDVHPGANYVLRPDGRRIKVTNVNKDDLAEKLEFGWVVERQLKDGDIVLFNRQPSLHKMSIMAHSVKVLPNKTFRLNPAVCPPYNADFDGDEMNMHALQTEESRAEAKVLMQVQENILSPRFGGPIIGGIHDHISGLFLLTRFENHILADDAYDMLRKSDIKELPSPAGYDSDGKPYWTGKQIFSQILPKNLNAQFSAQVCSHCDTCKKEECPNDAYVVIQDGELIAGTIDEAAIGAFKGKVQDRIIKEIGPEAGARFIDNMTMLAVRAIMRTGLSFGIADEDIPKEARIQINEVLNKAEDAVQNLIKSYQNKELEPLPGRTLDETIEMSIMQKLGKARDETGNIADSHMGLENSAVIMARSGARGSILNLTQMAACVGQQAVRGERIRRGYAGRTLPHFQKGDLGSDAHGFVKASYKSGLNPTEYFFHAIGGREGLVDTAVRTSQSGYLQRRLVNALQDLEVQYDLTVRDTRGVLVQFKFGEDGINPTKSDFSKPDTIHRIVNSVANREVA*