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S10_scaffold_1932_curated_10

Organism: S10_Micrococcales_72_9_curated

near complete RP 45 / 55 MC: 3 BSCG 47 / 51 MC: 3 ASCG 10 / 38 MC: 5
Location: comp(8968..9318)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 n=1 Tax=Salinispora pacifica RepID=UPI00037F43A1 similarity UNIREF
DB: UNIREF100
  • Identity: 60.0
  • Coverage: 95.0
  • Bit_score: 101
  • Evalue 4.70e-19
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:KGM00499.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.0
  • Coverage: 94.0
  • Bit_score: 115
  • Evalue 3.40e-23
rpoE; RNA polymerase ECF-subfamily sigma factor similarity KEGG
DB: KEGG
  • Identity: 60.4
  • Coverage: 96.0
  • Bit_score: 99
  • Evalue 3.90e-19

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Taxonomy

Cellulomonas cellasea → Cellulomonas → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 351
GCGGACCGCTACGCCACGCTGGCCGCCCGCACGCGGTCGCCGTGGGTCGAGCTGAGTCGCGCTGTCGCCGTGGCGATGGCCGAGGGCCCCGACGCCGGGCTCGCCCTTGTGGCCGAGGTAGAGGCGAGCGCGTCGCTCGGGCGATCCCACCTGGTCCCGGCGGCCCGGGCCGACCTGCTGCGCCGTGCGGGCCGACCGCGGGAGGCCGTCGTCGCCTACCGGGCCGCCATCGCACTCGTCACCAACGACGCCGAGCGTGAGTTCCTCCGCGACCGACTCGCCGAGGTCGACGCGCTCCTTCCCGCCGACGGCGCGACCGACGACCCCGCCGGGGGCGCGCCCACAGGCTAG
PROTEIN sequence
Length: 117
ADRYATLAARTRSPWVELSRAVAVAMAEGPDAGLALVAEVEASASLGRSHLVPAARADLLRRAGRPREAVVAYRAAIALVTNDAEREFLRDRLAEVDALLPADGATDDPAGGAPTG*