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S12_scaffold_110_curated_8

Organism: S12_Firmicutes_42_19_curated

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(6988..8982)

Top 3 Functional Annotations

Value Algorithm Source
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.8
  • Coverage: 660.0
  • Bit_score: 767
  • Evalue 1.20e-218
DNA ligase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YE26_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 58.8
  • Coverage: 660.0
  • Bit_score: 767
  • Evalue 8.70e-219
  • rbh
ligA; NAD-dependent DNA ligase LigA similarity KEGG
DB: KEGG
  • Identity: 55.2
  • Coverage: 658.0
  • Bit_score: 712
  • Evalue 7.20e-203
  • rbh

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Taxonomy

Holdemania filiformis → Holdemania → Erysipelotrichales → Erysipelotrichia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1995
ATGAGTATTCAACGCATCACTGAATTACGAAAACTTTTAAATGAATATAATCATGCGTATCACGTATTGGATAATCCCATCGTTTCCGATGCTTATTACGATGCCTGTATGCGCGAACTGATTAAGTTGGAAAGCGAATTTCCCCAAACTTTTGATTCATACTCCCCGACCCAACGAGTCGGTGGTAAAGTGTTGGACGGCTTTAAAAAAGTTACCCATGATGTTGCCATGTTATCCTTAGGCAATGCCTACTCTCTGGCTGATTTGCTTGCTTTCGATGCGCGCATCCGCAAAGATATCGGAGAAGTCGAATACGTTGCGGAACTGAAAATTGACGGACTCGCGATGTCGCTGCGCTATCAAAACGGTCGGTTGGCGATGGCCGCGACCCGTGGTGACGGTGAAGTCGGTGAAGATGTGACTCATAACATCGTAACGATCAAGTCGATTCCTTTGGAATTGAATACGGATATGTCCTTTGAGGTTCGCGGGGAAGTTTATATGCCCAAAGCCGCCTTTGAAAAGTTGAATGAAAGTAAAAAGAGCAGCGGTCAGGAACCCTTCGCAAATCCGCGCAATGCGGCAGCCGGATCGATCCGGCAATTGGACTCGCAGGTGGCGGCTTCACGGCAGCTCGATGCTTACCTCTATTATTTTGTCAATGCACAATCCTATGGGATTGATTCCCATGGACAAGCGCTACATAAGTTAAGTGATTTGGGATTTAAGGTCAATCCGCTTACCCGCACCTTTGCCAATATTCAGGATGTCTGGTCGTTTATCGAAGAAATGACCGCACAACGGGCAACGCTTCCATATGATATTGACGGCATCGTCATTAAAGTGAATTCACTGGCTTTGCAAGGCCGATTGGGCTTTACCGCCAAGACCCCGCGTTGGGCCATTGCCTATAAGTTTCCCGCAGATGAAGTCATGACCCGCTTGGAAGATATTTTCTTGACGGTGGGTCGTACCGGAAAAGTCACGCCCAACGCTAAGCTGACACCGGTATTTTTAGCGCAGACCACCGTCGGATTTGCTCAGCTTCATAATGAGGATTATATCCGTAACAAGGATATTCGTGTCAATGACATGGTCTTGGTACGAAAAGCCGGGGATATTATCCCGGAAGTTGTTTCTTCACTGCCTCAGTTAAGAGAAGAAACGAGCAGACCCTATGAATTTGCGAAGTTTTGTCCGGTATGTCATCAGGATTTGGTGCGCTTTGAAGATGAGGCGGATACATACTGCATCAACAATGAATGTCCGGCAAGGATCATTGAGGCGATTGCGCACTTTGCATCCAGGGATGCGATGAATATTGAGGGATTGGGCGTTAAACGGGTCGAGCAATTGTACAACAACGGTCTGATTCGCTCGGTTGAGGATATTTACTTTTTGAGAGATCAACGTGAGTCGCTCACAACGTTGGATAAGATGGGTGAGAAATCCGTGGATAAACTATTGAATGCCATTGAGGTAAGTAAAAGTAATTCTCTGGATAAATTACTCTATGGATTAGGGATTCGTCATATCGGTGAGAAAGCCGCCTTTACTTTAGCTGCACAGTTTAAATCGATGCATGCGTTGATGGCTGCACGTGAAGATCAGCTGAGTGATGTCAAGGAAATCGGAACGGTCATGGCAAAATCTGTGGTTCTGTTTTTCTCACAACAACCCAATCATCATCTGATCGAGGTGTTGCTTTCGGTGGGTGTCAATATGGAAATGACGAAGAAAAAAGTCGAAAGTTCATCTTTCTTTTCCGGTAAGACCGTGGTTTTGACCGGAACTTTGATTGAGATGACGCGCAGTGAGGCATCCGATTGGTTAATCAGTCAGGGAGCCAATGTGACGTCTTCGGTATCAAAGAATACCGATTTGCTCATCGCAGGAGTTGAGGCGGGTAGTAAACTGGCGAAAGCTGAAAGTCTAGGAGTCATTATTTGGGATGAAGACCGATTTATGAGGGAGGTGACCTCCATTGAAAGTTAA
PROTEIN sequence
Length: 665
MSIQRITELRKLLNEYNHAYHVLDNPIVSDAYYDACMRELIKLESEFPQTFDSYSPTQRVGGKVLDGFKKVTHDVAMLSLGNAYSLADLLAFDARIRKDIGEVEYVAELKIDGLAMSLRYQNGRLAMAATRGDGEVGEDVTHNIVTIKSIPLELNTDMSFEVRGEVYMPKAAFEKLNESKKSSGQEPFANPRNAAAGSIRQLDSQVAASRQLDAYLYYFVNAQSYGIDSHGQALHKLSDLGFKVNPLTRTFANIQDVWSFIEEMTAQRATLPYDIDGIVIKVNSLALQGRLGFTAKTPRWAIAYKFPADEVMTRLEDIFLTVGRTGKVTPNAKLTPVFLAQTTVGFAQLHNEDYIRNKDIRVNDMVLVRKAGDIIPEVVSSLPQLREETSRPYEFAKFCPVCHQDLVRFEDEADTYCINNECPARIIEAIAHFASRDAMNIEGLGVKRVEQLYNNGLIRSVEDIYFLRDQRESLTTLDKMGEKSVDKLLNAIEVSKSNSLDKLLYGLGIRHIGEKAAFTLAAQFKSMHALMAAREDQLSDVKEIGTVMAKSVVLFFSQQPNHHLIEVLLSVGVNMEMTKKKVESSSFFSGKTVVLTGTLIEMTRSEASDWLISQGANVTSSVSKNTDLLIAGVEAGSKLAKAESLGVIIWDEDRFMREVTSIES*