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S12_scaffold_104_curated_30

Organism: S12_Novosphingobium_64_29_curated

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(34530..36524)

Top 3 Functional Annotations

Value Algorithm Source
Threonine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00184}; EC=6.1.1.3 {ECO:0000255|HAMAP-Rule:MF_00184};; Threonyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00184}; Short=ThrRS {ECO:0000255|HAMAP-Rule:MF_00184};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.5
  • Coverage: 663.0
  • Bit_score: 1287
  • Evalue 0.0
thrS; threonyl-tRNA synthetase (EC:3.1.1.- 6.1.1.3) similarity KEGG
DB: KEGG
  • Identity: 93.5
  • Coverage: 663.0
  • Bit_score: 1287
  • Evalue 0.0
  • rbh
Threonine--tRNA ligase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=SYT_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 93.5
  • Coverage: 663.0
  • Bit_score: 1287
  • Evalue 0.0
  • rbh

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Taxonomy

Novosphingobium aromaticivorans → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1995
ATGTCCGAACTGCTCAAGATTACCCTGCCCGATGGTTCGCTGCGCGAAGTGGCAAGCGGCACCACGCCGGCTGACATTGCCGCCGCGATCGGTCCGGGCCTGGCCAAGGCGGCGCTCGCAGCCAGGGTGGATGGCGAACTGGTGGATCTTTCACGCCCCCTTGCCGCCGATGCGCACCTGGCGCTGGTTACCGCCAGGGACGAGGCCGACGCACTGGACCTTGCCCGGCACGATTACGCCCACGTCCTTGCCGAAGCAGTGCAGGCGCTGTTTCCGGGCACGCAGATCACGTTCGGGCCGAGTACGGACGACGGGTTCTATTACGATTTTGCCCCGAAGGACCGCCCCTTCACCGACGAGGATCTGCCCGCGATCGAGGCGCAGATGCGCAAGATCATCGCTGCCAACAAACCGTTGCGCCGCGAGGAGTGGAGCCGCGAACAGCTTGTCAGCCGGTGGAAGCAGCAGGGCGAAAGCTTCAAGGCGGAATGGGCCGCGGAACTTCCCGGCGACGAGCCGCTGACCGTGTACTGGTCAGGCGACGACTGGCTGGATATGTGCCGGGGTCCGCACTTGCCCTCCACCGGGAAGCTGGACCCGAACGCCTTCAAGCTGACGCGCGTTTCGGGCGCCTACTGGCGCGGCGACCAGAACAACGCGATGCTCAGCCGCATCTACGGCACCGGCTGGCTCAACAAGAAGCAGCTCGACGCGCACCTGACGCGGCTGGAAGAAGCGGCCAGGCGCGATCACCGCAAGCTGGGCGGGGAGATGGACCTGTTCCACCTTCAGGCCGAAGCGCACGGCAGCGTGTTCTGGCACCCCAAGGGCTATCTGATCTGGCGCGAGCTGGAAGCCTACATGCGCCGCGCGATCGACGGCGCGGGCTACCGCGAGGTCAAGACCCCGCAGGTGATGGACGCGCGCCAGTGGGAACAGTCCGGCCACTGGGGCAAGTACCGCGAAAACATGTTCGTGATCCCCGACGAAGTGCCGAACGTCGACGACGAAGGCCCGGTGATTTCCGGCGAGGCCGACTGGATGGCGTTGAAGCCGATGAACTGCCCGGCGCACGTCCTGATCTTCCGCCAGGGGCTGAAATCCTACCGCGACCTGCCGCTGCGCCTCTATGAAAACGGCTGCTGCCACCGCAACGAACCGCACGGCGCGCTGCACGGGCTGATGCGCGTGCGCCAGTTCACCCAGGACGATGCCCACATCTTCTGCCGCGAAGACCAGATCGTGGCCGAAGTGCAGGCGTTCTGCGAGCTGGCCGACCGCATCTACCGCGATTTCGGCTTCACGTATGCGATCAAGCTGGCACTGCGCCCGGAAAAGCGGTTCGGCACGGAAGAGATGTGGGACAAGGCCGAAGCCGAACTGCGCGCCGCCGTGGTGCGCGCTGGCCTTGCGACCGAAGAATACGGCTGGGAAGAACTGCCCGGCGAAGGCGCGTTCTATGCGCCCAAGCTGGAATGGCACCTGACCGACGCGATCGGCCGCACCTGGCAGGTCGGCACGATCCAGTCCGACCGCGTCCTGCCCGAACGGCTTGATGCCAGCTATGTGGCCGAAGACGGGGAAAAGCACCGCCCGGTCATGCTGCACCGCGCGATCTTCGGTTCGTACGAACGCTTCATCGGCATCCTGATCGAACATTTCGCCGGGCGCCTGCCGGTCTGGCTTGCCCCGGTGCAGGCGGTGGTGGCGACGATCGTTTCGGACGCGGACGGGTATGCGAAGGATGCGCTGGCCCGGCTCAAGGCGGCGGGCATCCGCGCCGAAACCGATCTGCGCAACGAAAAGATCAACTACAAGGTGCGCGAACACTCCTTGCAGAAGGTGCCGTTCCTGCTGGTAGTCGGCAAGCGCGAGGCCGAGGAAGGCACCGTGGCGATCCGCACCCTTGGCGAACAGCACCAGAAGGTGGTCCCGCTGGACGAAGCGATTGCCCTGCTGAAGGGTGAGGCTACCCCGCCCGACTTGCGGCCCTGA
PROTEIN sequence
Length: 665
MSELLKITLPDGSLREVASGTTPADIAAAIGPGLAKAALAARVDGELVDLSRPLAADAHLALVTARDEADALDLARHDYAHVLAEAVQALFPGTQITFGPSTDDGFYYDFAPKDRPFTDEDLPAIEAQMRKIIAANKPLRREEWSREQLVSRWKQQGESFKAEWAAELPGDEPLTVYWSGDDWLDMCRGPHLPSTGKLDPNAFKLTRVSGAYWRGDQNNAMLSRIYGTGWLNKKQLDAHLTRLEEAARRDHRKLGGEMDLFHLQAEAHGSVFWHPKGYLIWRELEAYMRRAIDGAGYREVKTPQVMDARQWEQSGHWGKYRENMFVIPDEVPNVDDEGPVISGEADWMALKPMNCPAHVLIFRQGLKSYRDLPLRLYENGCCHRNEPHGALHGLMRVRQFTQDDAHIFCREDQIVAEVQAFCELADRIYRDFGFTYAIKLALRPEKRFGTEEMWDKAEAELRAAVVRAGLATEEYGWEELPGEGAFYAPKLEWHLTDAIGRTWQVGTIQSDRVLPERLDASYVAEDGEKHRPVMLHRAIFGSYERFIGILIEHFAGRLPVWLAPVQAVVATIVSDADGYAKDALARLKAAGIRAETDLRNEKINYKVREHSLQKVPFLLVVGKREAEEGTVAIRTLGEQHQKVVPLDEAIALLKGEATPPDLRP*