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S12_scaffold_643_curated_18

Organism: S12_Novosphingobium_64_29_curated

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(17480..18637)

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Sphingomonas sp. S17 RepID=F3X2N8_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 80.3
  • Coverage: 385.0
  • Bit_score: 572
  • Evalue 2.40e-160
  • rbh
DNA, contig: SP643 {ECO:0000313|EMBL:GAN14535.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.3
  • Coverage: 385.0
  • Bit_score: 576
  • Evalue 1.80e-161
metal ion efflux membrane fusion protein family similarity KEGG
DB: KEGG
  • Identity: 51.7
  • Coverage: 387.0
  • Bit_score: 357
  • Evalue 3.40e-96
  • rbh

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Taxonomy

Sphingomonas paucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1158
ATGAACGACAAGAACCGCCTCTATGCCGGTGCCGCCCTTGGGCTGGTCGCCGCCGCCGCGCTCGGCTTCGGTGCCGCGCGCCTCACGCAGCCTTCCGCCTCTGCTCCGGCAGCAGAAACGGAGTCGCAAGCTTCGGCTGCACCAACCGATACGATAGCCATATCGCAGCAGGGCATCGCCGCGTCACAGATCGGCATTGCTCCCGCCGCGTCCGGTGAACTGGACGCGGCGATCCCGGCCGCCGCCACGGTTGAAGCTACGCCGGATGCCGAGGCGGTGTTGACCGCAAGAGCGCCCGGCACCGTGACCCGAATCTTCAAGCGGATCGGCGATCCCGTCGGGCAAGGTGAAACCCTCGCTCTCGTTGAGAGCCGGGATGCTTCGACGATCGCCGCCGATCAGGCGGCGGCGGCGGCGCGCGTCACGCTCGCCAACCGCCAGCTCGCGCGTGAGCGGGGCTTGCTGGCGCAAGGTGTGAGTCCGAGAGCTGACTATGAAGCCGCCGAAGCGAATCTCGCCGTCGCACAGGCCGATGCCCGCCGGGCGAGCGCGGCTGCGGGCGCAGCAAGGGTGTCGAGAGACGGCCGCTCGGTCGCGGTGGTGAGCCCGGTCAGTGGCCGCATCACGTCGGCTCCCGCCAATCTCGGCCAGTTCGTCGCTGCGGAAACCGAACTGTTCCGCGTTGCCGATCCGCGCCGTCTGCAAATCACGGCCAGCATTCCTCCGGCAGACGCCGGGCGCGTGCGCACAGGCGATCGCGTCGAACTCACCGTCAGCGACGGCCGCACCATCGAGGGCCGCGTCCGGTCCGCGACCGGCGTGATCGATCCGCAGAGCCGGGCAGCGACCGTCGTCATCGAGCCGAAGGGTGACGCGGGCTTGCTCGCTCCGGGGCAGCTCGTCCAGGCGCGCATTTTTGCGAGCGGCGGTGCCGTCAAAGATGGCGTTATGGTGCCGCAGGATGCCGTGCAGACGATCGGGGATCGCACCGTCGTCTTCGTTCGGACCCGTGACGGCTTCAAGGCGCAGACGGTCCAGGCCGGCAGCCGCAGCGGCGGGCTCGTTGCCATCGTCTCCGGCCTCAAGGCCGGGACGCCGATCGCCACCACCAACGCTTTCCTGCTGAAAGCCGAACTCGAAAAGGAGTCGGCGGAATGA
PROTEIN sequence
Length: 386
MNDKNRLYAGAALGLVAAAALGFGAARLTQPSASAPAAETESQASAAPTDTIAISQQGIAASQIGIAPAASGELDAAIPAAATVEATPDAEAVLTARAPGTVTRIFKRIGDPVGQGETLALVESRDASTIAADQAAAAARVTLANRQLARERGLLAQGVSPRADYEAAEANLAVAQADARRASAAAGAARVSRDGRSVAVVSPVSGRITSAPANLGQFVAAETELFRVADPRRLQITASIPPADAGRVRTGDRVELTVSDGRTIEGRVRSATGVIDPQSRAATVVIEPKGDAGLLAPGQLVQARIFASGGAVKDGVMVPQDAVQTIGDRTVVFVRTRDGFKAQTVQAGSRSGGLVAIVSGLKAGTPIATTNAFLLKAELEKESAE*