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S12_scaffold_5602_curated_3

Organism: S12_Parvibaculum_59_8_curated

partial RP 34 / 55 BSCG 37 / 51 ASCG 8 / 38
Location: 2163..3032

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000255|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000255|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000255|HAMAP-Rule:MF_00222};; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.0
  • Coverage: 277.0
  • Bit_score: 406
  • Evalue 2.40e-110
Shikimate dehydrogenase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=AROE_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 74.0
  • Coverage: 277.0
  • Bit_score: 406
  • Evalue 1.70e-110
  • rbh
shikimate 5-dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 74.0
  • Coverage: 277.0
  • Bit_score: 406
  • Evalue 4.80e-111
  • rbh

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Taxonomy

Parvibaculum lavamentivorans → Parvibaculum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 870
ATGATGGATAACGTTCCCGTCATTGCAAAAGTATGTGTCATGGGCTGGCCCATAGCTCATTCACGCTCGCCCTTGATCCACAATTTCTGGATCAGGCAATTGGGCATCAAGAACGCCATCTATGAGCGCCTCGCTGTCCCGCCGGACGAATTACAGGAGACAGTGAAGAATCTCGTCGATTGGGGTTTTATTGGCGCCAATGTCACAGTCCCGCACAAGGAAGCGGTGTTTGCCTGCCTGATGCGCCACGACGCCGTCGCCAAGCGACTGAAAGCGGTCAATACAATCGTCTTGACGCCAGCCGGTCTCGAAGGTCGCAATACTGATGGTTATGGCTTTATGGCCAATCTCTTTCAGGCTGCGCCAAGTTGGAAAGCAAGCCAGGGTCCCGTCGTCATGCTCGGGGCAGGCGGCGCGGCGCGCGCCATCGCCGCCGCTCTTGATGATGCCGGCGCAACGGAAATTCGCATCGTCAACCGAACCCGCTCGCGCGCTGAAACGCTGGCCAGCGATCTGGGCCTGAAAAACGCCACCATCTTTGCCTGGGAACAGATCGACGAGGCGCTGGTCAACGCGAATCTCCTTGTGAATACAACAACACTTGGCATGAAAGGCGAGCGCGATCTCACCATTGATTTGACGCCTCTGCCCGCGACGGCGCTGGTCACCGACATTGTGTATACGCCGCTTGAGACGGGCCTATTGCGAGCGGCGCGTTTGCGCGGTCTAACCACGGTGGACGGGCTTGGCATGCTACTTCATCAGGCGGTACCAGGATTTGAAGCATGGTTTGGCAAGCGGCCTCAAGTATCGGCCGAGTTGCGCGCGCTCGTGCTTGCGGACATGGGAATTACGGAGGGAAGATCCTGA
PROTEIN sequence
Length: 290
MMDNVPVIAKVCVMGWPIAHSRSPLIHNFWIRQLGIKNAIYERLAVPPDELQETVKNLVDWGFIGANVTVPHKEAVFACLMRHDAVAKRLKAVNTIVLTPAGLEGRNTDGYGFMANLFQAAPSWKASQGPVVMLGAGGAARAIAAALDDAGATEIRIVNRTRSRAETLASDLGLKNATIFAWEQIDEALVNANLLVNTTTLGMKGERDLTIDLTPLPATALVTDIVYTPLETGLLRAARLRGLTTVDGLGMLLHQAVPGFEAWFGKRPQVSAELRALVLADMGITEGRS*