ggKbase home page

S12_scaffold_2229_curated_3

Organism: S12_Parvibaculum_59_8_curated

partial RP 34 / 55 BSCG 37 / 51 ASCG 8 / 38
Location: comp(680..1495)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07QQ2_RHOP5 similarity UNIREF
DB: UNIREF100
  • Identity: 51.5
  • Coverage: 274.0
  • Bit_score: 208
  • Evalue 8.30e-51
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 51.5
  • Coverage: 274.0
  • Bit_score: 208
  • Evalue 2.40e-51
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABJ05732.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.5
  • Coverage: 274.0
  • Bit_score: 208
  • Evalue 1.20e-50

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 816
TTGACCCTCGAACAGCTCCGCATCTTCATCGCCGTCGCCGAACGCGAACATGTCACCAAAGCCGCCACCGCTCTTGGCCTCACGCAATCGGCTGTCAGCTCCGCGGTCGCCGCGCTTGAATCnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAATCGGGAACCCTTGGCCGCGGTACTCTCACGGTCCATGCCAGCCAGACCATCGCCTCCTATTGGCTTCCCGCCCGCCTGGTTGAATTCCGCAAGGCCTACCCCAAAATCGAGGTCCGCCTCGCCGCGGGCAATACCGAGACGGTAGCGCAGGCTGTTCTCAATGGTGTCGCCGATCTCGGTTTTGTCGAAGGTGCAGTGCGCAATGCGGCCCTTTCAGCCCGCGAGGTTGGTGGTGATCGCCTTGTCCTCGTCGTCGGGGCAGGTCACCCGCTCGCCAGACGCCGCCGTCTGCCAGTCGCCGATCTCGGCGATTATCCCTGGGTCGTGCGTGAGCCGGGGTCAGGGACTCGCTCCGAGATGGAAGCCGCCCTGATCGGACTCAAGCTCTCCATTCATGACCGCGACTTCGCGCTGGAACTGCCCTCCAACGAGGCCGTCCGCGCCGCCATTGAGGCAGGCGCAGGCATTGGCGGCATGTCCGAACTTGTTGCAGCCCCCGGCCTGGCCGCAGGCACGCTCCACCGCCTTCCTGTCGATATGCCCCGCCGTTCCTTCCTCGCGCTCGCCCATCGTGAACGCCGGCTCAGCAAGGCGGGCGAGGCCCTGATGGCCCTTTGTGCGCCCGTGCTGGGCCGGGCAAAAAGAAACAGCCGTTAA
PROTEIN sequence
Length: 272
LTLEQLRIFIAVAEREHVTKAATALGLTQSAVSSAVAALEXXXXXXXXXXXXXSGTLGRGTLTVHASQTIASYWLPARLVEFRKAYPKIEVRLAAGNTETVAQAVLNGVADLGFVEGAVRNAALSAREVGGDRLVLVVGAGHPLARRRRLPVADLGDYPWVVREPGSGTRSEMEAALIGLKLSIHDRDFALELPSNEAVRAAIEAGAGIGGMSELVAAPGLAAGTLHRLPVDMPRRSFLALAHRERRLSKAGEALMALCAPVLGRAKRNSR*