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S12_scaffold_6371_curated_3

Organism: S12_Rhizobiales_64_8_curated

partial RP 41 / 55 MC: 9 BSCG 38 / 51 MC: 9 ASCG 7 / 38 MC: 2
Location: 1692..2525

Top 3 Functional Annotations

Value Algorithm Source
Putative transmembrane component of ABC transporter n=1 Tax=Pseudomonas sp. Lz4W RepID=M5QF17_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 55.8
  • Coverage: 260.0
  • Bit_score: 297
  • Evalue 8.20e-78
Peptide ABC transporter permease {ECO:0000313|EMBL:KJZ61470.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.2
  • Coverage: 258.0
  • Bit_score: 301
  • Evalue 7.90e-79
ABC-type dipeptide/oligopeptide/nickel transport system, permease component similarity KEGG
DB: KEGG
  • Identity: 55.7
  • Coverage: 264.0
  • Bit_score: 296
  • Evalue 5.10e-78

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Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 834
ATGACCCGCCTGTTCCGCTCTCTCGGTTGGATCGGTTCTGGTCTTGGCCCGATCCTGCTCATCAGCGTCGTGTTGCTTGCCATCGCCGGCCTGGTCTGGACGCCGTTCGACCCCAACGCGCTCAACTTCGCCTACCGCTACCGGCCGCCGGCCCTGCCTCACCTGATCGGCACCGACCATCTGGGGCGCGACCTGTTCAGCCGTCTGTTGCTGGGCGCCTCGACGAGCACCGCGGTCAGCGGTATGGCGGTGATTGGCGCTTTGCTGATCGGAAGCCTGCTCGGGGCCATTTCCGGCTATTTCATGGGCTGGGCGGATCGGGTTGCGATGCTGCTGACGGACGCAATCCTGGCCATGCCCGGCATCCTCCTGGCGCTTGGCATCATGACTGTCACCGGGCCCAGCGTGGCCGGGCTCGTCGGCGCCATGGCGATCACGTTCACGCCGGTGGTCTTCCGGGTCGTGAGATCGGCAGTCCTGTCGCTGCGGGAAAAGGAATTCATCGAGGCTTCACGGGCGCTGGGCAATCGCGATTTCTTTTCCATCACCTATCACATCTTGCCCAATTGCGTTGCCCCGCTCACGGTTGTTGGCACCAGCCTCTTCGGCTCGGCCATTCTCACCGAAAGTGCCCTCAGCTTCCTGGGCCTCGGCGTGCCGCCGCATGTGCCAACCTGGGGCGCCATGCTGTCGGACGGACGCAACATCTTCGCGCGCGCGCCCTGGGCCGTCATTTATCCCGGCCTTGCGATTTCCTATCTCCTGCTCGGGGTTAACCTCACTGGCGACACGCTCCGCGACCGGCTCGATCCTCGGGCGAAAGGACATATCTGA
PROTEIN sequence
Length: 278
MTRLFRSLGWIGSGLGPILLISVVLLAIAGLVWTPFDPNALNFAYRYRPPALPHLIGTDHLGRDLFSRLLLGASTSTAVSGMAVIGALLIGSLLGAISGYFMGWADRVAMLLTDAILAMPGILLALGIMTVTGPSVAGLVGAMAITFTPVVFRVVRSAVLSLREKEFIEASRALGNRDFFSITYHILPNCVAPLTVVGTSLFGSAILTESALSFLGLGVPPHVPTWGAMLSDGRNIFARAPWAVIYPGLAISYLLLGVNLTGDTLRDRLDPRAKGHI*