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S12_scaffold_5188_curated_4

Organism: S12_Rhizobiales_64_8_curated

partial RP 41 / 55 MC: 9 BSCG 38 / 51 MC: 9 ASCG 7 / 38 MC: 2
Location: comp(2029..2574)

Top 3 Functional Annotations

Value Algorithm Source
peptidase S26 n=1 Tax=Hoeflea sp. 108 RepID=UPI0003616F0A similarity UNIREF
DB: UNIREF100
  • Identity: 85.6
  • Coverage: 181.0
  • Bit_score: 317
  • Evalue 8.50e-84
  • rbh
conjugative transfer signal peptidase TraF similarity KEGG
DB: KEGG
  • Identity: 83.4
  • Coverage: 181.0
  • Bit_score: 314
  • Evalue 1.60e-83
  • rbh
Conjugative transfer signal peptidase TraF {ECO:0000313|EMBL:ADU42469.1}; Flags: Precursor;; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.4
  • Coverage: 181.0
  • Bit_score: 314
  • Evalue 7.70e-83

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 546
ATGAGCCGCCGCGGCATGCTCGCGGTGACGCTGCTCTCCGTGACCGGCATCGCCGCCACCAGCGTCGCCGACATGCCCACGAAACTCCTATGGAACGTCACCGCCAGCGCGCCGGTCGGCTTCTACACCATAGAACCGGCTGACCGGCTCACTGTGCCCGAGCTGGTCGCGGTCATGCCGCCCGAACCGCTCGCCGGATTCATGGTGGCGCGCGGCTATGTCGGTCGCGGCGTGCCGCTTCTGAAGCGTGTCTTCGGCCTGTCGGGACAGCGGGTATGCCGCTCCCGCCGCGCCATCACCGTCGATGGCATGGAGATGGGCGACGCGCTCGACCGCGACCGGATCGGGCGCACGCTGCCGGTCTGGCAGGGCTGTCGCGTCATCGCCGACGGTCAGCTCTTCCTCATGAACATCGATGCCCGTGACAGCCTGGACGGGCGCTACTTCGGCTCCATTCCGGCCAGCGCCGTCATCGGTCGCGCGCTGCCGCTCTGGACCGACGAGGACGGCGACGGCCGCTTCGTCTGGCGCGCGCCGACGCGCTGA
PROTEIN sequence
Length: 182
MSRRGMLAVTLLSVTGIAATSVADMPTKLLWNVTASAPVGFYTIEPADRLTVPELVAVMPPEPLAGFMVARGYVGRGVPLLKRVFGLSGQRVCRSRRAITVDGMEMGDALDRDRIGRTLPVWQGCRVIADGQLFLMNIDARDSLDGRYFGSIPASAVIGRALPLWTDEDGDGRFVWRAPTR*