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S12_scaffold_6004_curated_4

Organism: S12_Rhizobiales_64_8_curated

partial RP 41 / 55 MC: 9 BSCG 38 / 51 MC: 9 ASCG 7 / 38 MC: 2
Location: comp(2086..2910)

Top 3 Functional Annotations

Value Algorithm Source
nitrate ABC transporter permease n=1 Tax=Herbaspirillum seropedicae RepID=UPI0002FA2B92 similarity UNIREF
DB: UNIREF100
  • Identity: 64.1
  • Coverage: 270.0
  • Bit_score: 352
  • Evalue 2.10e-94
  • rbh
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component {ECO:0000313|EMBL:EJN02831.1}; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. YR522.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.8
  • Coverage: 271.0
  • Bit_score: 350
  • Evalue 1.90e-93
tauC; nitrate/sulfonate/bicarbonate ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 67.3
  • Coverage: 248.0
  • Bit_score: 346
  • Evalue 4.30e-93
  • rbh

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Taxonomy

Herbaspirillum sp. YR522 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 825
ATGAACCAGTCGCCATCGGCAACGGCCAATGCAGCCAATACCGCAGCGCGCGTCGTAAAGGTCGCGCGCCTCGCCGAATTCCGGCAGGCGGCGATCGCCATCGTCGGTGTGCTCGGCGGTCTCATCATCTGGCAAATTCTGAGCATCAACATATCCCCGCTCTTTCTTCCGTCTCCCTCCGATACCTGGGCCGCGGCGATCGAACTCGCCGAGGATGGCACTCTAGCCAAGTCCATCGTCGCTTCGCTCGCGCGCATCGGCAGCGGCTGGGCGCTCGGTATCCTGATCGGCGTGCCCTTAGGAATCCTGATGGGGCACTTCCGGCTCATTCGGGAGATCTTCGAGCCGTATATCGAGTTCTTCCGCTTCGTTCCGCCGATCGCCTTCATCACGCTGGCCGTCATCTGGCTGGGGCCGGGCGAGGAATCCAAGGTCGCCCTCATCTTCTATGCGACGGTCTTCATCATCGTGGTCAACATGATCGCCGGCGTGCAGGCCGTGAGCGAACTCAGGCTGCGCGCCGCCGCATCCCTGGGGGCCTCGCCCTTGCGGACCCTCATCACGGTGGTCGTCCCCTCGACCGTGCCTTTCATGGTCACCGGCGCGCGGCTCGCGATGGGCAATTCCTTCCTCACGGTGGTCTCGGCCGAGATCGTCGCGGCGCAGGACGGGCTCGGGGCGCTCATCTGGACGGCGCGCAACTATGGCCGCACGGAATGGGTGTTCGTCGGCATCATCATCCTCGGCCTGCTCGGCTATACCTGCGACAGGCTGCTGCGAATCTTCGCCCGCACATTCCTGAAGCGCTACAGCGTGACGGTGTAG
PROTEIN sequence
Length: 275
MNQSPSATANAANTAARVVKVARLAEFRQAAIAIVGVLGGLIIWQILSINISPLFLPSPSDTWAAAIELAEDGTLAKSIVASLARIGSGWALGILIGVPLGILMGHFRLIREIFEPYIEFFRFVPPIAFITLAVIWLGPGEESKVALIFYATVFIIVVNMIAGVQAVSELRLRAAASLGASPLRTLITVVVPSTVPFMVTGARLAMGNSFLTVVSAEIVAAQDGLGALIWTARNYGRTEWVFVGIIILGLLGYTCDRLLRIFARTFLKRYSVTV*