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S12_scaffold_2485_curated_3

Organism: S12_Rhizobiales_64_8_curated

partial RP 41 / 55 MC: 9 BSCG 38 / 51 MC: 9 ASCG 7 / 38 MC: 2
Location: 647..4267

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein TraA n=1 Tax=Paracoccus sp. TRP RepID=UPI000225FAF2 similarity UNIREF
DB: UNIREF100
  • Identity: 72.2
  • Coverage: 1250.0
  • Bit_score: 1737
  • Evalue 0.0
  • rbh
Putative conjugal transfer protein TraA {ECO:0000313|EMBL:EYR84192.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.6
  • Coverage: 1219.0
  • Bit_score: 1744
  • Evalue 0.0
Ti-type conjugative transfer relaxase TraA similarity KEGG
DB: KEGG
  • Identity: 68.2
  • Coverage: 1241.0
  • Bit_score: 1607
  • Evalue 0.0
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3621
TTGGCGATCTATCATGCAAGCATGAAGCCGGTATCGCGGGCTAGCGGCAGGAGCGCCGTTGCCTCTGCCGCTTATCGTGCTGGCGAGCGCCTAACGAACGAACGCGATGGCATCACGCACGATTTCACACGCAAGGAAGGTGTCGAGCATGCCGAAATCGTGCTGCCCGAGGGCGTGACGGCAGAATGGGCGAAAGACCGCCAAGCGCTTTGGAATGCCGCAGAAGCGGCCGAGAATCGGAAAGACGCGCGTGTTGCTCGCGAAATCGAGATCGCGCTACCGCACGAGCTGACAGCAGAGCAGCGCCTAGAGCTTACGCGGGAGTTCGCCCAGGATTTGGCGAACCGTTATGGCGGGGCGGTCGATTTCGCTATTCATCAGCCGCACGACGCAAGCGACGTTCGGAACCATCACGCGCACCTGTTGATGACCACGCGGCAAGTCGGGGAGGAAGGGCTTGGCGAGAAGACGCATATCGAGTGGAAGAATGTTCGCCTGTTGAACGAGGGGTTGCCCACCACGCAAATGCAGCTCCGCGATATTCGCCAGTCGTGGGAGCAACATGCGAGCGAGCATTTGGCGATGGCGGGCCATGATATTCGGATCGACCATCGTTCCCATCAGGAGCGCGGCCTAGAGCTTGAGCCGACCGAGCATATGGGCGTCCATGCCACGCAGATGCAGCGGCGCGGGCTGGACGTTGATCGGTCGCGGCTCAGCGAGGAAGCGGCGCAACGCAACGCGGACCTCATCAGGGAGAAGCCGGAGCAGGTTCTTGCGATCGTCACGAACGAAAAGAGCGTGTTCGATCGGCACGACATTGCGCGCACGTTGCATCGCTACATCAACGACGACGCCCAGGCGTTCCAGAACGCCTTTGCGACCGTCATGGCCTCGGCCTCCCTGGTCGAGTTGCAGCGCGAGCGGACGAACCCAGAGACAGGGGAGATCGAGCTTGCCCGGTATTCGACCCGCGAAATGGTCGGGATCGAATCCGGCATGGCGGAAACGGCCGAGCGGATGCACGAGACGCGGGGCTATGGCGTCGATCGGCGGCATGTCAGCCAAGCGATAGATCGGCAGGACGCCGCCATTCAGCGCAGCGCCGGGGATGCTTCCGCCCGGCTGTCCGACGAGCAGCGGCGGGCGATCGAGCATATCACCGGGCCGGAGGAAATTTCGGCGGTTGTCGGCTATGCCGGCGCGGGCAAGAGCACGATGCTTGCGGCCGCACGCGAGGCATGGGAGGCCCAGGGCTATACGGTTCACGGCGCGGCCTTGTCGGGAAAGGCGGCCGAGGGCTTGGAAGAATCTTCCGGCATCCAGAGCCGCACGCTCGCGTCCTACGAACATCGCTGGCAGAACGACCGCGGCACACTCGGCCGCGGCGACGTGTTCGTGATCGATGAGGCGGGCATGATCGGGAGCCGTCAGCTTTCCCGTTTCATCAACGAGGCCGAGCAGCGCGGGGCGAAGATCGTCCTAGTCGGCGATCATGAGCAGCTACAGGCGATCGGGGCCGGCGCACCCTTCCGCGCCATTGCCGAGCAGATCGGCCATGCCGAGCTGTCCGAGATTCGCCGGCAGCGGGTGGACTGGCAGCAGGGCGCATCCGTTGACTTCGCCTCGCACCGGACGGCCGAGGGCTTGGCCGCCTACCGGGAGCATGGCGATATTCGGCTCAGCGCGACGAAGGACGAGGCGCGCGGCGAGATCGTGCGCGATTACCTTGCCGATCGAGACGAGCGGCCGGAGGGCACGCGCGTTGCCATGGCGCATCGCAGGGCCGATGTGCGGGCCATCAATGACGAGATCAGATCGGCCCTGCAGGAGCGCGGCGAGCTGGCGAGAGGGGAGGACGCCGGCGAGCTGACATTCCAGACCAATGACGGAAAGCGATCGTTCGCGCCGGGCGACCGCATCGTGTTCCTTGAGAACAATCGCGACCTTGGCGTCAAGAACGGGATGCTTGGGACCGTCGAGAGCGTCGAGGCCGGCCGGATCGTCACGCAGCTCGACGGCAAGGGCGGCGACAGCATCAGCGTGCCGATGGGCGACTATCAGGCGATCGACCACGGCTATGCGACGACGATTCACAAGAACCAGGGCGCGACGGTCGACCGCGCCTATGTGATGGCGTCGGGCACGATGGACCGGCATCTAACCTATGTCGCCATGACCCGGCATCGCGACGGTGCGCGGCTCTATGCCGGCATGGACGAGTTTGCCGGCCGGAACGCCGACCAAATGTTGGCCCCAGGCCGCCTGGTCGAGCATGGGACCGCGCCCTATCAGCACGACCCGAAGAACCGCGACAGCTATTTCGTGACGCTGGAAAATGATCGGGGCCAGAAACACACAATTTGGGGCGTGGACCTTGAGCGCGCCATGAAAGAGGCCGCTCCTGAGATCGGGGACAAGATCGGCCTTGAGCATCGCGGATCAGAGACGGTGCGCCTTCCTGACGGCACAGAGGCGCAGCGCAATGCGTGGAAGGTACATGATGGCGGCGAGCTGGCCTATCGGCAGCTTGAAAACCGGCTCAGCCGATCGGGCGTGAAGGAAACGACGCTCGATTACACGCGCGACTTTGCCGAGCGGCGCGGGATTGCGGAGCAAATGGGCGTCCGGAGCGAGATCGAATTACGACCGGACAGGGAGTCGACGCAGGAGCAAACCCGGGCCGATCGTCATTCGCAGGATCGGGCGCAGCGGCCGAGCGTCGAGGCCGAAAAAAGGGGCGAGGATCCACGCCAAGTTTCCCACGCCGAGGATATCGCCCAGAATCATGTTCATCAGCCGAGGGACGATCGGCCGCCGCAGCAGCGCCGAGGCATGTTCGAGGGCCTGAAACTCGGGCGCGGAGCTGCGACCGAGGGGCCGCAGCAGGACCGCGCCGAGCCGGCCCGGGAGCGGCCAGAGAGGGCCGAGAAGCCCCGGCGCGGTATGTTCGACGGCTTGAGGCTCAATGCCGCCTCAGCGGGCCAGGAACGGCCGGAAAGAGGGGAGCGCGAGCGGGAGGCGCCGGCGCTAGACCGGCAGACCGAGCGCTTGCGGCGGCCGTCCGATATGGAGCGCGCCATAGACCGCTATGCGCGGGCCTATGACGCGGCCGAGCGAAATCACCGTGAGGGCTTGCCGATCCTTGAGACGCAGAAGCAGGAATTGCGGCAGGCCGGCCATCAGCTCGACCAGGCGCGGCCGGGAGCGTCGGCGCTCATGGTGTCGGCCTTACAGCACGACCCGGAGACGCGACGGGCAATGACCGAGCTTTCCGGCCGCGAGCGTGTCGGGCAGCTCAGCGCCGGCATGGACCGGGAGCGCGCGGCACTGGCGGACCCGAACGTCAGGGCCGAACGGTTCGTCAATCGCTGGCAGGAGCTACAGGGGCAGCGCCAGGAGCTTCGCGGCTGGCAGCACGACGAGGCGCGCGGGAAGGTCGAGACGCAAATGCGCGGCATGGCGAAGGGCCTTGAGCGCGACCCGCAGGTTGAATCGATCCTGCGCAACCGCAAGCAGGACCTCGGAATCAATCACGGGCGGCAGAGCGAAAGCCTCGCCCGCGACATGGAGCAGAGCCTTACACGAGGCCGGAGCCAGAGCATGGGGATGGAACGATAG
PROTEIN sequence
Length: 1207
LAIYHASMKPVSRASGRSAVASAAYRAGERLTNERDGITHDFTRKEGVEHAEIVLPEGVTAEWAKDRQALWNAAEAAENRKDARVAREIEIALPHELTAEQRLELTREFAQDLANRYGGAVDFAIHQPHDASDVRNHHAHLLMTTRQVGEEGLGEKTHIEWKNVRLLNEGLPTTQMQLRDIRQSWEQHASEHLAMAGHDIRIDHRSHQERGLELEPTEHMGVHATQMQRRGLDVDRSRLSEEAAQRNADLIREKPEQVLAIVTNEKSVFDRHDIARTLHRYINDDAQAFQNAFATVMASASLVELQRERTNPETGEIELARYSTREMVGIESGMAETAERMHETRGYGVDRRHVSQAIDRQDAAIQRSAGDASARLSDEQRRAIEHITGPEEISAVVGYAGAGKSTMLAAAREAWEAQGYTVHGAALSGKAAEGLEESSGIQSRTLASYEHRWQNDRGTLGRGDVFVIDEAGMIGSRQLSRFINEAEQRGAKIVLVGDHEQLQAIGAGAPFRAIAEQIGHAELSEIRRQRVDWQQGASVDFASHRTAEGLAAYREHGDIRLSATKDEARGEIVRDYLADRDERPEGTRVAMAHRRADVRAINDEIRSALQERGELARGEDAGELTFQTNDGKRSFAPGDRIVFLENNRDLGVKNGMLGTVESVEAGRIVTQLDGKGGDSISVPMGDYQAIDHGYATTIHKNQGATVDRAYVMASGTMDRHLTYVAMTRHRDGARLYAGMDEFAGRNADQMLAPGRLVEHGTAPYQHDPKNRDSYFVTLENDRGQKHTIWGVDLERAMKEAAPEIGDKIGLEHRGSETVRLPDGTEAQRNAWKVHDGGELAYRQLENRLSRSGVKETTLDYTRDFAERRGIAEQMGVRSEIELRPDRESTQEQTRADRHSQDRAQRPSVEAEKRGEDPRQVSHAEDIAQNHVHQPRDDRPPQQRRGMFEGLKLGRGAATEGPQQDRAEPARERPERAEKPRRGMFDGLRLNAASAGQERPERGEREREAPALDRQTERLRRPSDMERAIDRYARAYDAAERNHREGLPILETQKQELRQAGHQLDQARPGASALMVSALQHDPETRRAMTELSGRERVGQLSAGMDRERAALADPNVRAERFVNRWQELQGQRQELRGWQHDEARGKVETQMRGMAKGLERDPQVESILRNRKQDLGINHGRQSESLARDMEQSLTRGRSQSMGMER*