ggKbase home page

S12_scaffold_36_curated_2

Organism: S12_Starkeya_67_31_curated

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: comp(118..597)

Top 3 Functional Annotations

Value Algorithm Source
tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000255|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmL {ECO:0000255|HAMAP-Rule:MF_01885}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.5
  • Coverage: 153.0
  • Bit_score: 239
  • Evalue 2.10e-60
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI0003642EF9 similarity UNIREF
DB: UNIREF100
  • Identity: 79.9
  • Coverage: 154.0
  • Bit_score: 248
  • Evalue 2.50e-63
tRNA/rRNA methyltransferase SpoU similarity KEGG
DB: KEGG
  • Identity: 76.5
  • Coverage: 153.0
  • Bit_score: 239
  • Evalue 4.30e-61

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Starkeya novella → Starkeya → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 480
ATGACGCTCGCCCTTGCCCTCTACCAGCCCGACATCGCCCAGAATGCCGGCACGCTGGCGCGCACTGCCGCCTGTTTCGGCCTGTCGCTGCACATCATCGAGCCGGCCGGTTTTCCCGTGGGCGACGCCGGCTTTCGCCGCGCCGGCATGGATTATCTCGACCGCACCGCCATTCGCCGGCATGCGAGCTTCGAGGCCTTCCAGGCCTGGCGCGAAGATGAGGGTCGCCGGCTCGTGCTCTGCACCACGAGCGGTGCCGTGCCCTATGTCGAATTCTCCTTTGACCCGAGCGACATCCTGCTGCTCGGCCGCGAAAGCGCGGGAGTGCCGGAAGATGTGCACAGGCGGGCGCAGGCGCGAATCATCGTGCCGATGGCACCCAATCTGCGCTCGCTGAACGTTGCCGTGGCCGGGGCGATGATTCTCGGCGAGGCACTGCGGCAGACCGGGGGATTCGCGGGGAAGGCCGGCCCACGCTAG
PROTEIN sequence
Length: 160
MTLALALYQPDIAQNAGTLARTAACFGLSLHIIEPAGFPVGDAGFRRAGMDYLDRTAIRRHASFEAFQAWREDEGRRLVLCTTSGAVPYVEFSFDPSDILLLGRESAGVPEDVHRRAQARIIVPMAPNLRSLNVAVAGAMILGEALRQTGGFAGKAGPR*