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S12_scaffold_939_curated_27

Organism: S12_Starkeya_67_31_curated

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: 12881..13897

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.6
  • Coverage: 338.0
  • Bit_score: 656
  • Evalue 2.00e-185
DNA-directed RNA polymerase subunit alpha n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A977_STAND similarity UNIREF
DB: UNIREF100
  • Identity: 97.6
  • Coverage: 338.0
  • Bit_score: 656
  • Evalue 1.40e-185
  • rbh
DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 97.6
  • Coverage: 338.0
  • Bit_score: 656
  • Evalue 4.10e-186
  • rbh

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Taxonomy

Starkeya novella → Starkeya → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1017
GTGATTCAGAAGAACTGGCAAGAGCTGATCAAGCCCGAGAAGCTCGAGGTCGCGGTCGGCAGCGATCCGAAGCGGTTTGCGACCGTGGTGGCGGAGCCGCTGGAGCGTGGTTTCGGCCAGACGCTCGGCAATGCGCTGCGTCGTATTCTGCTGTCCTCGCTGCAGGGCGCGGCTGTGACGTCCGTCCATATCGATGGCGTCCTGCACGAGTTCTCCTCGATTCCGGGCGTTCGCGAGGACGTGACCGACATCGTCCTGAACATCAAGGACATCGCCATCAAGATGGCCGGCGACGGCCCGAAGCGCATGGTGGTGAAGAAGCAGGGTCCGGGCATCGTCACCGCCGGTGACATTCAGACCGTCGGCGACGTGCAGGTGCTGAACCCCGAGCTGGTGCTCTGCACGCTCGACGACGGCGCCGAGATCCGCATGGAATTCACGGTCGACACCGGCAAGGGCTACATTGCCGCCGACCGCAACCGTCCCGAGGACGCGCCGATCGGTCTCATCCCGGTCGACAGCCTGTACTCGCCGGTCAAGAAGGTCTCCTACAAGGTTGAGAACACCCGCGAGGGTCAGATTCTCGACTATGACAAGCTGACCCTCTCCATCGAGACCAACGGCTCGGTCAGCCCGGAAGATGCGCTGGCCTATGCCGCGCGAATCCTGCAGGACCAGCTTGAGATCTTCGTGAATTTCGAGGAGCCCAAGCGCGAGACGGAAAGCCCGGCGATCCAGGAGCTGCCCTTCAACCCGGCGCTGCTGAAGAAGGTCGACGAGCTGGAGCTGTCGGTTCGTTCGGCGAACTGCCTGAAGAACGACAACATCGTCTACATCGGCGACCTGATCCAGAAGACCGAGGCGGAGATGCTCCGTACCCCGAACTTCGGCCGCAAGTCGCTGAACGAGATCAAGGAAGTTCTCGCCAGCATGGGCCTGCACCTCGGCATGGAAGTGCCGGGCTGGCCGCCCGAGAACATCGAAGACCTCGCCAAGCGCTTCGAAGATCACTACTGA
PROTEIN sequence
Length: 339
VIQKNWQELIKPEKLEVAVGSDPKRFATVVAEPLERGFGQTLGNALRRILLSSLQGAAVTSVHIDGVLHEFSSIPGVREDVTDIVLNIKDIAIKMAGDGPKRMVVKKQGPGIVTAGDIQTVGDVQVLNPELVLCTLDDGAEIRMEFTVDTGKGYIAADRNRPEDAPIGLIPVDSLYSPVKKVSYKVENTREGQILDYDKLTLSIETNGSVSPEDALAYAARILQDQLEIFVNFEEPKRETESPAIQELPFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLNEIKEVLASMGLHLGMEVPGWPPENIEDLAKRFEDHY*