ggKbase home page

S12_scaffold_456_curated_29

Organism: S12_Starkeya_67_31_curated

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: comp(26446..27231)

Top 3 Functional Annotations

Value Algorithm Source
Putative transmembrane anti-sigma factor n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D6ZZP9_STAND similarity UNIREF
DB: UNIREF100
  • Identity: 76.3
  • Coverage: 266.0
  • Bit_score: 388
  • Evalue 3.30e-105
  • rbh
transmembrane anti-sigma factor similarity KEGG
DB: KEGG
  • Identity: 76.3
  • Coverage: 266.0
  • Bit_score: 388
  • Evalue 9.40e-106
  • rbh
Putative transmembrane anti-sigma factor {ECO:0000313|EMBL:ADH91244.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.3
  • Coverage: 266.0
  • Bit_score: 388
  • Evalue 4.60e-105

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Starkeya novella → Starkeya → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 786
ATGACCCTTCCCGTTGATCCGGTCTCCGATGCCGATCTGCAGGCCTATGTCGACGACGAGCTTTCCGTGGCGCGCCGTATCGATGTCGAGGCCCATCTGAGCGCGCATCCGGCGCAGGCCTCGCGGGTGATGGCGGATCTGCGCATTCGCGACGAACTGCGCCTGGCCTTGGCCGACGCGCCGCGCCCGGTGGCCTCCGGCGCTGGGCTGGCCACCATGGAGGCGGCGCGGCGGCTGGAGGGCGGACTGTCGCGCCAGAGCTGGATGCGCCGGCTGCGCATCGCCGCCTCGGTGGCGCTGCTCATTGGCGCCGGCTGGCTGGCGCATGGCCAGTTCGGCCCGCTCGGAGTGAGCCGCGTGGTCGCCTCCGACCTGCCGCCCGCCTATCTGGAGGACGCCGTGCGCGCCCACCGCACCACGCTGCTGCGGGCCGGCATGAATTCGCAGGCCGGCACCTCCGCCTACGACCCCGCGGAAATCCGCGCCGCCACCGCCATCGTCATGCCGGCCCTGCCGGAGGACTGGCAGGTGAGCGACGTGCAGGTCTTCCCCTCCGCCTTCGGCCCCAGCGTCGAAATGTCGGTGAAGACCAAGGATTTCGGCGCCGTCTCGCTGTTCGCGGTGCGTCCGGGCAGCTTCGACGTTGTGCCGGCGACGACCGTGCCGACCGGCGATCTCAACGCGGCCTATTGGCAGGTCGGCGAGGTCGCCTATGCGCTGGTCGCCAAATCCGAGAGCCGCGAGCTCGACCGCGCGGCGGCGCGGCTCGCGCGCTCCCTCTACTGA
PROTEIN sequence
Length: 262
MTLPVDPVSDADLQAYVDDELSVARRIDVEAHLSAHPAQASRVMADLRIRDELRLALADAPRPVASGAGLATMEAARRLEGGLSRQSWMRRLRIAASVALLIGAGWLAHGQFGPLGVSRVVASDLPPAYLEDAVRAHRTTLLRAGMNSQAGTSAYDPAEIRAATAIVMPALPEDWQVSDVQVFPSAFGPSVEMSVKTKDFGAVSLFAVRPGSFDVVPATTVPTGDLNAAYWQVGEVAYALVAKSESRELDRAAARLARSLY*