ggKbase home page
Advanced Search
Search Help

S12_scaffold_1419_curated_1

Organism: S12_Starkeya_67_31_curated

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: comp(1..5175)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
Apolipoprotein A1/A4/E n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A294_STAND similarity UNIREF
DB: UNIREF100
  • Identity: 48.5
  • Coverage: 1881.0
  • Bit_score: 1491
  • Evalue 0.0
  • rbh
Apolipoprotein A1/A4/E {ECO:0000313|EMBL:ADH89557.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.5
  • Coverage: 1881.0
  • Bit_score: 1491
  • Evalue 0.0
apolipoprotein A1/A4/E similarity KEGG
DB: KEGG
  • Identity: 48.5
  • Coverage: 1881.0
  • Bit_score: 1491
  • Evalue 0.0
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Starkeya novella → Starkeya → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 5175
ATGTCGACGAATACGAAGAAGGTTCACCAGGATCCCGCGGAGGCCGCGCTATCGGCCATCGAGGAGGCCCTGAGTCTCGACCTCACCAGCGATGACGACAACGCCGCCTCCGACCATGGCGACGACGGCTTCGATCTGCCGCCTGCACGCGAACCGAACGGACCGCGCATCGAAGAGCGCAGCCGCTCCACGCTCGACGAGCCGCTCGGCGAGGAACAGACCTTCCTGAGCGCCAGCGATCTGGAAGCCGAGGAAGACGCCGGCACCGAGTTCGGCCACGCCGACTTCGAGCTGCCGCTGGAAACCGCGGCGGAACAGGTCGAGCCCACCTTCGATTTCGGCTTCGAGGGCCAGACGCGCGGCGACTTCACGCCGGATGTGAGCCTGCGCGCGCCCGACGTGACCGCGAGCGGCACCCTCGCCGCCGGCCCGGAGCTTGCCGCCCTCGCCCCGGCCGCAGCCGCCGCCGTCGCAACGACCGCCGCCGCCTCCGAGGCGCCGCGTGGCACCACGCGTGCCGCGAAGCCCGAGCGCCGCGCGGCCAATGACGACCGCCAGACCATCGGCCAGCTGCTTTCCGCGCTGCAGCGCCGCCCGCCGGCCACGCCGTATTTTCTGGCCGCCGGCGCCTCCGCCGCGTGGCTCGGCATTGGCGGCGTGCTCACCTATCTGCATGTCGGGCAGGCGGGCATCGACGCCTTCTCCGCCCCCGCTCTGCTGGCGACCGCCGCCGGACTTGTCGTTCCCCCGGTCTTCTTCTTCGTGCTGGCGGCCATGATCAGCCGCATGCAGGAAATGCGCATCGTCGCGCACTCCATGGCGCAGGTGGCCATCCGCCTCGCCGAGCCCGACCACGGCACCACCACCGAGGCGGTGGTTAATGTCGGCCAGGTCGTGCGCCGCGAAGTCGCCGCCATGGGCGACGGCGTGGAGCGCACCATCGCCCGCGCCAGCGAGCTGGAAGCGCTGGTGCGCACCGAGATTTCCACGCTCGAAAACGCCTATGAAGAGAACGAGGTGCGCATGCGCCACCTCATCGAGCGCCTTCAGGCCGAGCGCGAGATCATCCTCAGCCACGCCGACCACATCCGCGACGCGATCTCGACCGCGCACTACTCCTTCGCGACCGAAGTGAGCGGCGTCAGCGACCGCATCAATTCGACGGTGCTCGATGCCGCCGACCGCGTGACCAACACGCTGTCGGAGAAGGGCGAGCACATCACGCTCGCGCTCGGCCGCGTCGGCGACACCATCATCGACGCCCTGACCGAGAAGGGCGGCGACCTGATTGACCGCCTGCAGGCGACCGGCACGGACGTCAACACCAACCTGTCCGACGCCAGCGAGCACCTCATCTCGACGCTCAGCACGCAGAGCGACGAAATCAGCCAGCGCCTCTCCGGCGTGACCGCCAACCTCACCGACACGCTGCAGACCCGCACCGACGAGATCGGCCAGAAGCTGCTGAGCACCGCTTCCGAGCTGTCCAATGTGGTGACCTCGCGCACGCAGGAACTGAGCGACAAGCTGAACGCGACGACGGAGAACCTTACCGACACGCTGACCGCGCGTTCGGACGAGATCACCGATGCGCTGGTCGGCACCGGCACCCGTCTCGCCGACGAGATCGCGGTGCGCGCCAACGAGGTCAACCAGACCCTGCGCGCCACCGGCGATTCGCTGGTGCTCGACATGTCGGTCCGCGGCGGCGAAGTCGTGCGCAAACTGGAAGAGACCGGCAACCGCGTCGCCGAGACCATCACCGTGCGTGGCGACGACCTTGCCGACCGCATCGCCGACACCGGCAACCGCATCTACGACACCATCGCGGTGCGTGGCAGCGAGCTTGAGCGCCTGCTCGGCGAAACCGGCCAGCGCGTGGTCCACCAGCTCTCCGAAGCCGGCGCCAACGCCCACGACACGCTGGCCGAGGCCGCCGACCGCTTCTCGCAGGACATCAATTATCGCGGCACCGCGATGAGCGACCAGCTGGCCCAGGTCGGCGCGGAAGTGGCGAACGCCATTGCCGCCCGCGGCACCCGCGCCAACGACCAGTTCCGCGAGACTGCGGAAACTCTGACCGCCACGCTCGGCAACCGCGCCGATGCGGTGCGTGAGATGCTCGGCTCGCGCCTCAAGGCGATCGAGGAAACCGTCACGGTTCAGGGCGCGGAAGTCGCCGATCGCATCGCCACCGACGCCAATCTGCTCGGCCGGCAGATCACCGACGGCCTGCGCGATTTCGAGAACGTGCTGCAGGGCCAGGGCGGCGCCGTGGTCCAGCGCATCACCGAGCGCGTCGATGCCATCACCCGCGCGATGGACGACAACCTCTCGGGCTTCGACGACCAGATCACGGCCAAGACCGAGACCATCGCCGCCTCGCTCGACCTGCGCATCGCCAACATCGAAGGTGTGCTGGACCGTGGCGTGGAAGGTCTCAACGAGACGCTGGCCGGCCGCACCCAGGAATTCGCCCAGACCATGACGGAGGGCGCCCGCCTCGCCACCGACGCGATGGACAAGTCGCTCGGCGTGCTGGACGGCTTCTTCAGCCAGCATGCGCAGGACGTGACGGCCAACATTGGCGAGCGCATCGACCTCGCCGCCCGCACCATGACGGAGGGCGCTGCAAAGGCCAATGAGGCGATGAGCCACTCGCTCGACGTGCTCGGCAAGTTCTTCGACGATCGGGCGATCACCGTCACCGAGCAGCTCTCCGAGCGCATCGAGCAGGTCGACCGCACCCTTGCCGCCCGCGCGATGGAAATCGCCGACACGCTGGATATCCGCGTCAACCGCTTCGAGGAAACCGTCGTCGGCCGCATGGACAATGTCGCCACCTCGGTCGAGGTGCGTGGCGCGGCCATGGCCGATCTGCTCGGCCAGCGCATCGGTGCCGTCGCCGGCCAGCTGCGCAACGAGGCGAGCGAGATCGAGAGCAGCCTCACCTCGCTGGTCGACAATGTCAGCCGCACGCTGGTCGACCGCGCCGGCGATGTGACCTCGCTCTTCGACAGCCGCACGGAAGAACTCGCCCGCATCGTCGAGGAGCGCGGCAACGGTCTGCTGGCCTCGCTGGAAGACCGTAGCCTCGGCATCACCAGCGAGATTTCCCGCGCCAGCTCCGAGCTGCTCGCTGCGATCGACGATCATCGCGACAACATGGTGCGCGCGCTCGACACCACCCGCACCGGCGCGGTGGACGACATCATGCGCGCCAGCGAAGACCTGCTGCACACACTGGAGACCCGCTCCGACGCCATCGTGAACGCGTTCGAGCAGGCCACTGGCGGACGCACCGAGCAGCTCATGCAGATGAGCGACGAGGTGCTGAACACGGTCGAACAGCGCACTGCCGGCCTCCTGGACGCCTTCCAGCGCTCCAGCCAGAACACGGCGGGCGAGATGGCCCGGATCGGCGACGACCTGCTGGCCAATCTCAACAACCAGAGCGGCGACGTGGTCTCCGCCCTCCAGCAGCTCAGCGGCCAGGTCACGGGCGAGATCGCCCGCGCCGGCGACGCGCTGCTCACCGAGTTCGACGGGCGCGGCTCGCACCTCGTCGACACGGTCCGCCATGTCAGCGGCCAGGTGGTCGACGAGATAGCCCGCGCCAGCGACGCCCTGCTCGCCGAATTCGACGGGCGCGGCTCGCAGCTGGTCGATACGGTGCGCCAGACCAGCGACGTCACCTCCGCCGAGTTCACCCGCCTCACCGACACCTTCATCCGCACGCTCGACGAGCGCGGCACCAGCCTGGTCGATGCGGCCCGCCAGACGGCGGAGTTCGCCTCCACCGAGCTGTCGCGTGTCAGCGAGGAGTTCATCGGCAATCTGGACGGGCGCGGCAGCAACATCGTCGACGCGGCCCGCCAGACCGCCGAATACACCTCCGGCGAGCTTAGCCGCCTGACCGAGGAGTTCATCGGCGCGCTGGAAGGACGTGGCGGCACCATCGTCGACGCGGCCCGCCAGACCACCGAATACACCTCCGGCGAACTGAACCGCCTTGCGGAAGAGTTCATCGGCGCACTGGAAGGCCGTGGCGGCACCATCGTCGATGCGGCCCGCCAGACCACCGAGTTCACCTCGGGCGAGCTGTCGCGCCTCACCGAAGAGTTCGTCAGCACCCTGGAAGGGCGTGGCGCCGGGCTCATCGAGTCGATCTCCGAGAGCGGCCGCGCCGCTGTCTCCGAGATCGCCGCGACCAACCAGGCGCTGCAGGGCGACGTGTCCTCGCTGCTGGAGCGTCTCGGCGACGTCAACATCCAGCTGCAGGACGTGCTCTCCTCGTCGGCGACCAACCTCGCCTCCATCGAGCAGACCATCACCGAGCGGCTGGGCAGCTTCCAGAGCACCGTCGACAGCGTCGACGAGGCCAGCCGCGTCGCCTCGACCCGCATGGACGAGCAGATTCGCGAGCTGCGCACCGTCTCCACCAGCGTACTGCAGCATGTCACCGCGCTCAGCCAGAACTTCGGCGAGCAGGCGAACATCATCACCAGCGTCGCCAGCGCCCTCGGCGCAGCGCACGAGAACCTGGACGAGACGCTCGGCGGTCGCCACGAGGCGCTGCTGGCCCTTGCGCAGGACGTCGGCGGGCGCGCCAGCGAGCTGGACGGACGCCTCGCCGCCTATACCCGCTCGCTGGAGGAGACCTTCAACCGGGCGGAACAGCGCGCGAGCGAACTGTCCAAGTCGATCCTCGCCTCCACCAGCGAGTCGGCCGAGGCCATCATCGCCCAGCAGGAAGAGCTGCGCAGCGCGACAGAAAGCGGCCGCGAGCGCACCCTCGCCGTGCTGCGTGAGACCTATGAGCAGGCCGTGCGCGAAGTGAGCACGCTGATGGGCGAGGCCAGCCAGGGCTTCACCGGCACGGCCGAGGAGCTGCGCAGCTCCGTCGCCGACATCAAGATGCTGCTGGAGACCACCCGCGAGGAGATCAAGCGCGGCATTCTGGAGCTGCCCGAGGAAACCGAGGCCAACGCCTCGGCCATGCGCCGCACCATTGCCGAGCAGATCAAGGCGCTGGCCGAGCTGAACGACATCGTCTCCCGCCACGGCCGTTCGCTGGACGTCGATACGGGTGTGCGCACTGCCCGTGCGCCGGCCCAGCCCACGCCGGTCGCGGCGGCGCCCGCGCCGGCCCCTGCCCCGGTGGCGGTGGCTCCG
PROTEIN sequence
Length: 1725
MSTNTKKVHQDPAEAALSAIEEALSLDLTSDDDNAASDHGDDGFDLPPAREPNGPRIEERSRSTLDEPLGEEQTFLSASDLEAEEDAGTEFGHADFELPLETAAEQVEPTFDFGFEGQTRGDFTPDVSLRAPDVTASGTLAAGPELAALAPAAAAAVATTAAASEAPRGTTRAAKPERRAANDDRQTIGQLLSALQRRPPATPYFLAAGASAAWLGIGGVLTYLHVGQAGIDAFSAPALLATAAGLVVPPVFFFVLAAMISRMQEMRIVAHSMAQVAIRLAEPDHGTTTEAVVNVGQVVRREVAAMGDGVERTIARASELEALVRTEISTLENAYEENEVRMRHLIERLQAEREIILSHADHIRDAISTAHYSFATEVSGVSDRINSTVLDAADRVTNTLSEKGEHITLALGRVGDTIIDALTEKGGDLIDRLQATGTDVNTNLSDASEHLISTLSTQSDEISQRLSGVTANLTDTLQTRTDEIGQKLLSTASELSNVVTSRTQELSDKLNATTENLTDTLTARSDEITDALVGTGTRLADEIAVRANEVNQTLRATGDSLVLDMSVRGGEVVRKLEETGNRVAETITVRGDDLADRIADTGNRIYDTIAVRGSELERLLGETGQRVVHQLSEAGANAHDTLAEAADRFSQDINYRGTAMSDQLAQVGAEVANAIAARGTRANDQFRETAETLTATLGNRADAVREMLGSRLKAIEETVTVQGAEVADRIATDANLLGRQITDGLRDFENVLQGQGGAVVQRITERVDAITRAMDDNLSGFDDQITAKTETIAASLDLRIANIEGVLDRGVEGLNETLAGRTQEFAQTMTEGARLATDAMDKSLGVLDGFFSQHAQDVTANIGERIDLAARTMTEGAAKANEAMSHSLDVLGKFFDDRAITVTEQLSERIEQVDRTLAARAMEIADTLDIRVNRFEETVVGRMDNVATSVEVRGAAMADLLGQRIGAVAGQLRNEASEIESSLTSLVDNVSRTLVDRAGDVTSLFDSRTEELARIVEERGNGLLASLEDRSLGITSEISRASSELLAAIDDHRDNMVRALDTTRTGAVDDIMRASEDLLHTLETRSDAIVNAFEQATGGRTEQLMQMSDEVLNTVEQRTAGLLDAFQRSSQNTAGEMARIGDDLLANLNNQSGDVVSALQQLSGQVTGEIARAGDALLTEFDGRGSHLVDTVRHVSGQVVDEIARASDALLAEFDGRGSQLVDTVRQTSDVTSAEFTRLTDTFIRTLDERGTSLVDAARQTAEFASTELSRVSEEFIGNLDGRGSNIVDAARQTAEYTSGELSRLTEEFIGALEGRGGTIVDAARQTTEYTSGELNRLAEEFIGALEGRGGTIVDAARQTTEFTSGELSRLTEEFVSTLEGRGAGLIESISESGRAAVSEIAATNQALQGDVSSLLERLGDVNIQLQDVLSSSATNLASIEQTITERLGSFQSTVDSVDEASRVASTRMDEQIRELRTVSTSVLQHVTALSQNFGEQANIITSVASALGAAHENLDETLGGRHEALLALAQDVGGRASELDGRLAAYTRSLEETFNRAEQRASELSKSILASTSESAEAIIAQQEELRSATESGRERTLAVLRETYEQAVREVSTLMGEASQGFTGTAEELRSSVADIKMLLETTREEIKRGILELPEETEANASAMRRTIAEQIKALAELNDIVSRHGRSLDVDTGVRTARAPAQPTPVAAAPAPAPAPVAVAP