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S13_scaffold_477_curated_12

Organism: S13_RifCSP_Burkholderiales_66_15_curated

near complete RP 50 / 55 MC: 3 BSCG 50 / 51 ASCG 11 / 38
Location: comp(10504..12024)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator id=5080113 bin=GWF1_Burkholderiales_GWF1_66_17 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 98.6
  • Coverage: 506.0
  • Bit_score: 986
  • Evalue 7.00e-285
  • rbh
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 51.8
  • Coverage: 481.0
  • Bit_score: 474
  • Evalue 1.90e-131
  • rbh
Tax=GWE1_Burkholderiales_65_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 98.6
  • Coverage: 506.0
  • Bit_score: 986
  • Evalue 9.80e-285

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Taxonomy

GWE1_Burkholderiales_65_30_curated → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1521
ATGCCCGCGCCCCCTTCCCCGCTCGCGCTGTGTCCGGCCCCGTCGGTCGAACCGGTCCCCGCCCTGCCGCTGTACCAGCAGATCGCGCAGACACTCGCGCAGCTGATCCACAGCGGTGCGTTCAAGGTCGGTCAGCGCCTGCCGTCTGTGCGGGCCACGGCGCTGACGCAGGGCGTGTCCATCTCCACCGCGATGCAGGCCTACCGCCAGCTCGAAGAGCAGGGCCTGGTGCAGGCGCGACCCAAGGCGGGCTACTTCGTGCGCCGCGCCCAGCGCATCGCCCAGCCCGGCCTGAGCGCGCCGCCCCAGCGCAGCTTTCTGCTGGAGCGGCAAAGCCGTTCCGAGGCCTTCGCCATGCTGCACCAGCCCGGCGACCGGGCGACGTTTGGTGGCTTCACCCCGCAAAGCAGCGAACTGTTCGACGAGGACCGTCTGCGGGTGGCCATCGGCCGTGCCTCGCGGGTGCACCGGCACAGCCTGACCGAATACAACAAGGCCGATGCCGGACGGCCCGCGCTGCGTCAGGCGGTCGCCCAGCGCGCCCTGCAGCTGGGCTGCGCGCTGGACGCCAGCGACATCGTGATCACCGCCAGTTGCACGCAGGCTGTGAGCTTGTGCCTGCGCGCGGTCACACAGCCGGGGGACGTGGTGGCGCTCGAATCGCCCACTTTTTTTGGCTACCTCGACCTGATCGAATCCCTGGGCCTGCGGGTGCTGGAGATCCCCACGCACCCGGCCACCGGGCTCTCGCTGCCCGCGCTGGAACTGGCGCTGGACACACAGCCCGTCAAGGCCGTGCTCGCCGCGCCCACGTTGTCCAACCCGCTGGGATCGGTCATGCCGCTGGCGGCCAAGCAGCGGCTGGTGCGCCTGCTGGCCCAGCGGCGGGTGCCCTTGATCGAAGACGTGGTTTTCAACGACCTGTTGTCCGGGGACGAGCGGCGCAAAGCCGCCAAGTCCTGGGACTCCGAAGGCAACGTCATGGTCTGCGGATCGTTTGCGAAGACGCTGACGCCGGGGATCCGCCTCGGCTGGGTCGAGGCTGGTCGCTGGCGCGATGCCGTCGCCACTCACAAGCGCCTGCAGGGCGCCGCCACCAACGTGGTGCTGGAAGAGGCGCTGGCCGATCTGCTGACCCAAGGCAGCTACGAAGCCCACCTGCGCCGCCTCACGGCGTCCATGCGGCAACGCCGCCACGAAGCGCGCCACCTGATCGCCCACCACTTCCCCCCAGGAACGCGGGTGAGCAATCCGCCGTCGGGCGACACGCTGTGGCTGGAGCTGCATCCGGCGATCGCCAGCATGGACCTCTTCAAACGCTGCGCCAGCGAGGGCATCACCTTCGGCCCGGGTGAACTGTTCACCGCCACCGACCGCTACCGCAACTGCCTGCGCCTGAACTTCTCGGGCCCCTGGAACGCCGTCACCATGCAGGCCCTGGCGCGCATCGGCGAGATCGCGCGCCAGATGCTGGAGCGCCCCGCCGCCAGCCCGACGCCCCCGGTGTTGCGGCGCGCTTAG
PROTEIN sequence
Length: 507
MPAPPSPLALCPAPSVEPVPALPLYQQIAQTLAQLIHSGAFKVGQRLPSVRATALTQGVSISTAMQAYRQLEEQGLVQARPKAGYFVRRAQRIAQPGLSAPPQRSFLLERQSRSEAFAMLHQPGDRATFGGFTPQSSELFDEDRLRVAIGRASRVHRHSLTEYNKADAGRPALRQAVAQRALQLGCALDASDIVITASCTQAVSLCLRAVTQPGDVVALESPTFFGYLDLIESLGLRVLEIPTHPATGLSLPALELALDTQPVKAVLAAPTLSNPLGSVMPLAAKQRLVRLLAQRRVPLIEDVVFNDLLSGDERRKAAKSWDSEGNVMVCGSFAKTLTPGIRLGWVEAGRWRDAVATHKRLQGAATNVVLEEALADLLTQGSYEAHLRRLTASMRQRRHEARHLIAHHFPPGTRVSNPPSGDTLWLELHPAIASMDLFKRCASEGITFGPGELFTATDRYRNCLRLNFSGPWNAVTMQALARIGEIARQMLERPAASPTPPVLRRA*