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S13_scaffold_188_curated_29

Organism: S13_RifCSP_Burkholderiales_66_15_curated

near complete RP 50 / 55 MC: 3 BSCG 50 / 51 ASCG 11 / 38
Location: 32838..33437

Top 3 Functional Annotations

Value Algorithm Source
Bacterial regulatory protein, tetR family {ECO:0000313|EMBL:EWS64847.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.0
  • Coverage: 198.0
  • Bit_score: 372
  • Evalue 2.00e-100
TetR family transcriptional regulator id=5082719 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 93.9
  • Coverage: 198.0
  • Bit_score: 364
  • Evalue 5.10e-98
  • rbh
transcriptional regulator, TetR family similarity KEGG
DB: KEGG
  • Identity: 51.3
  • Coverage: 193.0
  • Bit_score: 177
  • Evalue 1.90e-42

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Taxonomy

Hydrogenophaga sp. T4 → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 600
ATGGTCACCAGCGAGCAGCACGAACACCGTTCGCGCTTGCTGCAAGCAATGGCGGGGGTGTCGGCCAACAAGGGGGTTGCCGCAGCCACCATTGCCGACATCGTGCGCGAAGCGGGGGTTTCCAAGCGCACGTTCTACGAACATTTTGACTGCAAGGAAACCTGCTTCCTGACGCTGTACCGGCTGACGAGTGCATCGGCACTGCGTACGCTGCGCGAAGCGGTGCAGCCCGATCGCCCCTGGCAAACCCAGGTGGAGCATGCGCTGGACGCCTATTTTGCGCATCTGGCGGCGGGGCCAGGGCTGGTCGGGACGCTGTTTGTTGAAATCCATCACCTGGGACCCGAAGGACTCCGGGTGCGCCGCGAAGTGATGGCGCAGTTTGCCGACTTTGTGCTGGAGACGGTCAACGGCGGGCCTGGTTCTGGCGGGGTGCCCTTGATCCCGGTGCTGACGCCCACCATGGCCCTCGCCGCGGTGGGGGGCATCCATGAGCTGGTGCTGCAGGCCATCGAGCGTGGAGAGGTCGACCGCCTTCAGGAACTGACACCCAGCGCCAGCGCGGTGGTGCGCCTGCTCACCCGGGCTGACGCAACCTAG
PROTEIN sequence
Length: 200
MVTSEQHEHRSRLLQAMAGVSANKGVAAATIADIVREAGVSKRTFYEHFDCKETCFLTLYRLTSASALRTLREAVQPDRPWQTQVEHALDAYFAHLAAGPGLVGTLFVEIHHLGPEGLRVRREVMAQFADFVLETVNGGPGSGGVPLIPVLTPTMALAAVGGIHELVLQAIERGEVDRLQELTPSASAVVRLLTRADAT*