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S13_scaffold_469_curated_1

Organism: S13_RifCSP_Burkholderiales_66_15_curated

near complete RP 50 / 55 MC: 3 BSCG 50 / 51 ASCG 11 / 38
Location: comp(439..2757)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma 70 subunit RpoD; K03086 RNA polymerase primary sigma factor id=5079413 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 99.9
  • Coverage: 772.0
  • Bit_score: 1492
  • Evalue 0.0
  • rbh
RNA polymerase sigma 70 subunit RpoD similarity KEGG
DB: KEGG
  • Identity: 77.9
  • Coverage: 795.0
  • Bit_score: 1176
  • Evalue 0.0
  • rbh
Tax=GWE1_Burkholderiales_65_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 99.9
  • Coverage: 772.0
  • Bit_score: 1492
  • Evalue 0.0

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Taxonomy

GWE1_Burkholderiales_65_30_curated → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2319
ATGCCTGCGAAGAAGTCCAGTACGCCTGTCCAGTCCAGCACAAAAACAGCCACCAAGGCCAAAGCTGGCACAGCCGCTCCCGAAGTGCCCAAGAAAACCTCTGTGACCGCCAAGATGCCTGCCAAACCCGCTGCCAAATCCCCCGCCCGCAAGAACGCTGCCGACGAGCTCGACGTTGTCGACGCGAGCGCCGAGTCGAAGAAAAAGGCGGGCCGCCCGGCCAAAGCCGCTTCGGCCGACAAACCCGCTGCCAAGCGCGGCCGCAAACCCAAGGCCGCTGCCAAAGAAGGCGCCGACCTGGATGACGCCGACCTGAGCGACATCGAAGACGACCTGACCGGTGAAGTCGAAGCCGAGACCGAAGTGGTCGACGCCACCGCCCAGCCGGTCGAGAAGGTCAAGCCGCTGCGCATGAAGATCAGCAAGGCCAAGGAGCGCGCGCTGATGAAGGAATTCGGCCTGGACGAGACCGTCCTGTCCGAAGAAGAAGCCAAGAACCGCCGCGAACGCCTCAAGACCCTGATCAAGCTGGGCAAGACGCGCGGCTACCTGACGCACGGCGAAATCAACGACCACCTGCCCGACAAGCTGGTCGAGGCCGAGACGCTGGAAGTGGTGGTTTCGCTGCTGAACGACATGGGCGTGGCCGTCTACGAACAGACGCCCGACGCCGAAACCCTGCTGCTGAACAACACCGGCCCGACCGCCGCGACCGAAGAAGAAGCCGAAGAAGAAGCCGAAGCGGCGCTCTCCACGGTGGACTCGGAATTCGGCCGCACCACCGACCCGGTGCGCATGTACATGCGCGAAATGGGCACGGTCGAGCTGCTGACACGCGAAGGCGAAATTGAAATCGCCAAGCGCATCGAAGGTGGCCTGAACGACATGATGGCCGCCATCAGCGAGAGCCCGGCCACCATCGCCGACATCCTGGCCATGGCCGAGGACATCCGCGAAGGCAAGGTCGTGATCTCCACCGTGGTGGACGGTTTTGCCGATGCCGACGCGGCCGACGATTACGTGGCCGAAGAAGACTTCGACGACTACGACGAAGCCGATGACGACGACGGCAAGGGCGGCTCCAAGGCCCTCACCCGCAAGCTCGAAGAACTCAAACGCGAAGCGCTGACCCGCTTCGACACCCTGCGCACGCTGTTCGAGAAGCTGCACAAGACCTACGACAAGGAAGGCTACGGCACGCCGACCTACCTGAAGACGCAGCTCGCCATCACCGAGACGCTGATGTCGATCCGCTTCACCGCCAAGGCGATTGAAAAGCTGTGCAGCACCATGCGCAGCCAGGTCGATGAAGTGCGCAAGAAAGAGCGCGAACTGCGCCGCATCATCGTGGACAAGTGCGGCATGCCGCAGGACAAGTTCATCGCCGACTTCCCGGCCAACCTGCTGAACCTGAAGTGGGTTGAAAAGCAGGCCGCTGCCGGCAAGCCGTGGAGCGTGATCATGCAGCGCAACATCCCACCGGTGCAGGAACTGCAGACCGGCCTGATGAACATCCAGAGCAGCGTGGTCGTGCCGCTGGCGCACCTGAAGGACATCCACAAGCGGATGAATTCGGGCGAATCCACCTCACGCGACGCGAAGAAGGAAATGATCGAGGCCAACCTGCGTCTCGTGATCTCGATCGCGAAGAAGTACACCAACCGTGGCCTGCAGTTCCTGGACCTGATCCAGGAAGGCAACATCGGCCTGATGAAGGCGGTGGACAAGTTCGAATACCGCCGCGGCTACAAGTTCTCGACCTATGCCACGTGGTGGATCCGCCAGGCGATCACGCGCTCCATTGCTGATCAGGCGCGCACGATCCGCATTCCGGTGCACATGATCGAGACGATCAACAAGATGAACCGCATCAGCCGCCAGCACTTGCAAGAACACGGCTTCGAGCCCGATGCATCCATCCTGGCCGAGAAGATGGAGATGCCGGAAGACAAGATCCGCAAGATCATGAAGATCGCGAAAGAGCCGATCTCAATGGAAACGCCCATCGGCGACGACGACGATTCGCACCTGGGCGATTTCATCGAAGACCAGGCGAACACCGCGCCCATCGAGGCCGCGATGCAGGCCGGTCTGCGCGACGTGGTCAAGGAGATCCTCGACAGCCTGACGCCGCGCGAAGCCAAGGTGTTGCGCATGCGTTTCGGCATCGAGATGTCGACCGACCACACGCTGGAAGAAGTGGGCAAGCAGTTCGACGTGACGCGCGAGCGCATCCGTCAGATCGAGTCGAAGGCGGTGCGCAAGCTCAAGCACCCGAGCCGTTCGGACAAGCTGCGCAGCTTCATCGATTCGATGTAA
PROTEIN sequence
Length: 773
MPAKKSSTPVQSSTKTATKAKAGTAAPEVPKKTSVTAKMPAKPAAKSPARKNAADELDVVDASAESKKKAGRPAKAASADKPAAKRGRKPKAAAKEGADLDDADLSDIEDDLTGEVEAETEVVDATAQPVEKVKPLRMKISKAKERALMKEFGLDETVLSEEEAKNRRERLKTLIKLGKTRGYLTHGEINDHLPDKLVEAETLEVVVSLLNDMGVAVYEQTPDAETLLLNNTGPTAATEEEAEEEAEAALSTVDSEFGRTTDPVRMYMREMGTVELLTREGEIEIAKRIEGGLNDMMAAISESPATIADILAMAEDIREGKVVISTVVDGFADADAADDYVAEEDFDDYDEADDDDGKGGSKALTRKLEELKREALTRFDTLRTLFEKLHKTYDKEGYGTPTYLKTQLAITETLMSIRFTAKAIEKLCSTMRSQVDEVRKKERELRRIIVDKCGMPQDKFIADFPANLLNLKWVEKQAAAGKPWSVIMQRNIPPVQELQTGLMNIQSSVVVPLAHLKDIHKRMNSGESTSRDAKKEMIEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQHLQEHGFEPDASILAEKMEMPEDKIRKIMKIAKEPISMETPIGDDDDSHLGDFIEDQANTAPIEAAMQAGLRDVVKEILDSLTPREAKVLRMRFGIEMSTDHTLEEVGKQFDVTRERIRQIESKAVRKLKHPSRSDKLRSFIDSM*