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S13_scaffold_237_curated_12

Organism: S13_RifCSP_Burkholderiales_66_15_curated

near complete RP 50 / 55 MC: 3 BSCG 50 / 51 ASCG 11 / 38
Location: 14662..15264

Top 3 Functional Annotations

Value Algorithm Source
TRAP-type mannitol/chloroaromatic compound transport system, small permease component {ECO:0000313|EMBL:EWS65232.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 200.0
  • Bit_score: 396
  • Evalue 1.70e-107
tripartite ATP-independent periplasmic transporter DctQ id=5079686 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 200.0
  • Bit_score: 394
  • Evalue 6.00e-107
  • rbh
TRAP-type mannitol/chloroaromatic compound transport system, small permease component similarity KEGG
DB: KEGG
  • Identity: 61.9
  • Coverage: 202.0
  • Bit_score: 253
  • Evalue 3.60e-65

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Taxonomy

Hydrogenophaga sp. T4 → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 603
ATGTCGTTCCTACTCCAAATATCCCGGCTCATTGATGCCGTCAGCGAGCTCATCGGCAAGCTGGCCATGTGGCTCATCCTGGCCGCCACGCTCATCAGCACGGGCAACGCCCTCATCCGAAAAATCTTCGGCACCAGCTCAAATGCCTGGCTTGAAATCCAGTGGTACCTGTTTGCCGCTGTGTTCATGCTCGGTGGTGGCTACGCCTTTCTGCGCAACGCGCACGTGCGCATCGACTTCATATCCAGCAAATTCACCGACCGAACCCGCAACTGGATCGATATCGGCGGCATCCTGGTCTTCCTGTTCCCCCTGTGCTACATGATGGTGACACTCGGCTGGCCCTTGTTCATCAACGCGCTGGAATCGGGCGAGATGTCGTCCAACTCCGGGGGGCTGATCCGCTGGCCGGTGTACGCCCTGATTCCGCTGGGCTTTGCGCTGCTGTTCGTGCAGGGCATCTCCGAACTGATCAAACGTTTTGCCTTCCTCAACGGTCAGGGTCCTGATGTCCTGAGCCATTCCGGCCCCAGTGAGACCGAACTGCTGGCGCAAGAGATCGCCGAACAGGAAAAAGCCCGTCAAGCGGGAGCATCAGCATGA
PROTEIN sequence
Length: 201
MSFLLQISRLIDAVSELIGKLAMWLILAATLISTGNALIRKIFGTSSNAWLEIQWYLFAAVFMLGGGYAFLRNAHVRIDFISSKFTDRTRNWIDIGGILVFLFPLCYMMVTLGWPLFINALESGEMSSNSGGLIRWPVYALIPLGFALLFVQGISELIKRFAFLNGQGPDVLSHSGPSETELLAQEIAEQEKARQAGASA*