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S13_scaffold_160_curated_16

Organism: S13_RifCSP_Burkholderiales_66_15_curated

near complete RP 50 / 55 MC: 3 BSCG 50 / 51 ASCG 11 / 38
Location: comp(21758..22876)

Top 3 Functional Annotations

Value Algorithm Source
TRAP transporter solute receptor, DctP family {ECO:0000313|EMBL:EWS64938.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 372.0
  • Bit_score: 751
  • Evalue 3.00e-214
twin-arginine translocation pathway signal protein id=5080626 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 99.2
  • Coverage: 372.0
  • Bit_score: 748
  • Evalue 1.80e-213
  • rbh
putative TRAP dicarboxylate transporter, subunit DctP similarity KEGG
DB: KEGG
  • Identity: 84.7
  • Coverage: 372.0
  • Bit_score: 659
  • Evalue 3.10e-187
  • rbh

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Taxonomy

Hydrogenophaga sp. T4 → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1119
ATGAGCGAGAAAAAGCCTGCCCCTTCACGCCGCAACATGATCAAAGGTGCGGCCGTTGCTGCGGGTGCCCTGTCGGTGCCCATGATCGCCACGGCGCAAACGACCAGCCTGCGCTTTCAGAGCACCTGGCCGTCGAAGGACATCTTTCACGAATACGCCACCGACTTCGCCAAGAAGGTCAATGACATGGCCGGTGGCAAGCTGAAGATCGAGGTGCTGCCCGCCGGTGCGGTGGTGCCTGCCTTCCAGTTGCTGGAGGCGGTGGCCAAGGGCACGCTGGACGGCGGCCATGGCGTGGTGGCCTATCACTACGGCAAGAACTCGGCCCTGGCCCTGTGGGGTTCCGGCCCGGCCTTCGGCATGGACCCCAACATGCTGCTGGCCTGGCACAACTACGGCGGCGGCAAGGCCCTGCTGGAAGAGATCTACAAGAGCCTGAGCCTGGACGTGGTGTCCTACCTGTACGGCCCTATGCCGACCCAGCCCTTCGGCTGGTTCAAGAAGCCGATCGCCAAAGCCGACGACCTCAAGGGCGTGAAGTTCCGCACCGTGGGCCTGGCGGTGGACATGTACACCGACATGGGCGCAGCGGTGAACCCCCTGCCCGGCGGCGAGATCGTGCCCGCACTGGACCGCGGCCTGATCGATGGCGCCGAATTCAACAACGCGTCGTCCGACAAGCTGCTGGGGTTCCCCGATGTGAGCAAGAACTGCATGCTGCAGAGCTTCCACCAGAGCGGCGAGCAGTTCGAGATCCTGTTCAACAAGGGCAAGCTCGCGGCGTTGCCCACCGAACTCAAGGCCATCATCGACTACGCGGTGCAGGCGGCCAGCGCCGACATGAGCTGGAAAGCGATCCAGCGCAACTCGGAGGACTACATCGAGCTGAAGAAACAGGGCGTGAAGTTCTACAAGACACCCGACGCCATCCTGCGCGCGCAGCTCGCGGCCTGGGACAAGATCATGGCCAAGAAGGGTGGCGAGAACCCGCTGTTCAAGAAGGTGCTCGACAGCCAGCGCGCCTTTGCCCAGCGTGCCGGCCAGTGGCAGAACGACTACACGGTCGACTTCAAGATGGCCTACAACCACTACTTCGGCAAGGGTGCAAAAAAGAGCTGA
PROTEIN sequence
Length: 373
MSEKKPAPSRRNMIKGAAVAAGALSVPMIATAQTTSLRFQSTWPSKDIFHEYATDFAKKVNDMAGGKLKIEVLPAGAVVPAFQLLEAVAKGTLDGGHGVVAYHYGKNSALALWGSGPAFGMDPNMLLAWHNYGGGKALLEEIYKSLSLDVVSYLYGPMPTQPFGWFKKPIAKADDLKGVKFRTVGLAVDMYTDMGAAVNPLPGGEIVPALDRGLIDGAEFNNASSDKLLGFPDVSKNCMLQSFHQSGEQFEILFNKGKLAALPTELKAIIDYAVQAASADMSWKAIQRNSEDYIELKKQGVKFYKTPDAILRAQLAAWDKIMAKKGGENPLFKKVLDSQRAFAQRAGQWQNDYTVDFKMAYNHYFGKGAKKS*