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S13_scaffold_278_curated_13

Organism: S13_Rhizobiales_66_18_curated

near complete RP 43 / 55 BSCG 43 / 51 ASCG 7 / 38
Location: 10202..11095

Top 3 Functional Annotations

Value Algorithm Source
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; TaxID=641118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium LMG 3301.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.7
  • Coverage: 297.0
  • Bit_score: 422
  • Evalue 3.30e-115
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23 4.2.99.18) similarity KEGG
DB: KEGG
  • Identity: 68.7
  • Coverage: 297.0
  • Bit_score: 414
  • Evalue 2.40e-113
  • rbh
5-hydroxymethyluracil DNA glycosylase n=1 Tax=Hoeflea sp. 108 RepID=UPI000374C9D0 similarity UNIREF
DB: UNIREF100
  • Identity: 72.4
  • Coverage: 297.0
  • Bit_score: 426
  • Evalue 2.10e-116
  • rbh

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Taxonomy

Ochrobactrum intermedium → Ochrobactrum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 894
GTGCCTGAACTGCCCGAGGTGGAGACGGTGCGGCGCGGGCTGGCTCCCGTGATGGAAGGCGCGCGCATCCTCCAGGTGGAGCAGCGGCGCGCCGACCTGCGCTTTCCCTTTCCGCCGGATTTTTCGCGTCGGCTGACGGGGCGGCGCATCGCATCGCTCTCGCGGCGGGCGAAATACCTCGTCGCCCAGCTGGACGACGATCTTTCGCTCATCAGCCATCTGGGCATGACCGGGTCGTTTCGCATCGAGGACACGGGACCGGGCACGACGCCGGGCGCATTTCATTTCGAACGGTCGAAGGACCAGGCGCACGACCATGTGATCTTTCATCTAGAGCCGGCGGCGGGCGGCAGGGCGCGGGTGGTGTTCAACGATCCGCGCCGCTTCGGCTTCATGCTGTTCGCCGAGCCGGGGCTGCTGGCGCAGCACAAGATGCTATCGGGGCTGGGCGTGGAGCCCACCGGCAACATGCTGGACGGCGCGCTGCTGGCGGCGCTGTTCCGGGGCAAGACGGCGCCGCTCAAGGCAGCGCTGCTCGACCAGCGGCTGATCGCAGGGCTGGGCAACATCTATGTGTGCGAGGCGCTGTGGCGGGCAGGACTGTCACCTTTCCGCGCGGCGGGGACGATCGCCTCGAAGGCCGGAGGCGCGACGGTCAGGTCGCAACGGTTCGCCACCGCGATCCGCGAGGTGATCGCGGACGCAATCGAGGCGGGCGGATCGTCCCTGCGCGACTACATGCACGCGGACGGCTCTCTCGGCTATTTCCAGCATTCCTTCGCGGTGTACGGCCGCGAGGGCGAGCCGTGCCGCAAGAGCGCCTGCGGCGGCGTGGTGCTGCGGGCGGTGCAGTCGGGGCGATCCACTTTCTATTGCCCAGCCTGTCAGCGATAG
PROTEIN sequence
Length: 298
VPELPEVETVRRGLAPVMEGARILQVEQRRADLRFPFPPDFSRRLTGRRIASLSRRAKYLVAQLDDDLSLISHLGMTGSFRIEDTGPGTTPGAFHFERSKDQAHDHVIFHLEPAAGGRARVVFNDPRRFGFMLFAEPGLLAQHKMLSGLGVEPTGNMLDGALLAALFRGKTAPLKAALLDQRLIAGLGNIYVCEALWRAGLSPFRAAGTIASKAGGATVRSQRFATAIREVIADAIEAGGSSLRDYMHADGSLGYFQHSFAVYGREGEPCRKSACGGVVLRAVQSGRSTFYCPACQR*