ggKbase home page

S13_scaffold_291_curated_29

Organism: S13_Rhizobiales_66_18_curated

near complete RP 43 / 55 BSCG 43 / 51 ASCG 7 / 38
Location: comp(23198..23617)

Top 3 Functional Annotations

Value Algorithm Source
lipopolysaccharide biosynthesis protein n=1 Tax=Rhizobium giardinii RepID=UPI00036654FF similarity UNIREF
DB: UNIREF100
  • Identity: 54.0
  • Coverage: 113.0
  • Bit_score: 129
  • Evalue 2.50e-27
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:EZQ13350.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.2
  • Coverage: 111.0
  • Bit_score: 129
  • Evalue 3.50e-27
lpsC; lipopolysaccharide core biosynthesis glycosyl transferase LpsC similarity KEGG
DB: KEGG
  • Identity: 54.1
  • Coverage: 111.0
  • Bit_score: 127
  • Evalue 2.70e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas bauzanensis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 420
ATGCTCCCTCCCTCCGATCCGCCGGCATTGAAGATCTCGGCATTCATCATCTGCAAGAATGAACGAGACCACCTGGCCGATTGCATAGCGAGTCTGGCGGGCTTCGCCGAGATCGTCATCGTCGATTCCGGTTCCACGGATGGAACGCTCGACATCATTCGCGCGTGTGCGGCGCGCGGTGTCCCGATCCGGCTGATCGAGCGGGAATGGCCGGGTTATGCCCGACAAAAGCAGTTCGCGATGGAACAGTGCACGCAGGAATGGTGCCTGAACCTCGATGCCGACGAACGGCTGGACGAACCGGCGCGCGCCTCCATTCGCGCGGCAATGCCAACCCGATCGCGGACGGCTATCGGCTGGCCCGGCGAGAATGGCTGCCGGGCTATGGCTTCTCCCATCCATGGGTGGCGCCGGAAATGA
PROTEIN sequence
Length: 140
MLPPSDPPALKISAFIICKNERDHLADCIASLAGFAEIVIVDSGSTDGTLDIIRACAARGVPIRLIEREWPGYARQKQFAMEQCTQEWCLNLDADERLDEPARASIRAAMPTRSRTAIGWPGENGCRAMASPIHGWRRK*