ggKbase home page

S14_scaffold_1393_curated_14

Organism: S14_RifleGW_Desulfovibrio_65_8_curated

near complete RP 43 / 55 MC: 2 BSCG 42 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: 7148..8188

Top 3 Functional Annotations

Value Algorithm Source
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 78.0
  • Coverage: 346.0
  • Bit_score: 537
  • Evalue 2.80e-150
  • rbh
DNA-directed RNA polymerase subunit alpha n=1 Tax=Desulfovibrio longus RepID=UPI0003B54277 similarity UNIREF
DB: UNIREF100
  • Identity: 80.1
  • Coverage: 346.0
  • Bit_score: 543
  • Evalue 1.10e-151
  • rbh
Tax=CG_Desulfovib_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 95.4
  • Coverage: 346.0
  • Bit_score: 644
  • Evalue 6.20e-182

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Desulfovib_01 → Desulfovibrio → Desulfovibrionales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1041
ATGCTTATTCAAAACGGCGACAAGCTTATCAATACACGCAACTGGTCCGAGCTGGTGAGGCCGGAACAGCTCGCGCGCGATCCCAAGTCTTCGGACATGTATGGGAAATTCGTGTGTGAGCCACTGGAGCGGGGATTTGCCACCACCATCGGCAACTCGCTTCGGCGCGTGCTGCTGTCTTCGTTGCAGGGGGCTGCCATTGTGGCCGTCCGCATTGAAGGCGTGCAGCACGAATTCACCACGGTCAAGGGCGTGCTTGAGGATGTCACCGAGATAGTCCTCAATCTCAAGCAGGTCCGCCTAGCCATGACCAGCGTCGAGCCCCAAAAGCTCGTGCTGGAGGCCAGGAAGAAGGGCCCGGTGACCGCCGCCCACATCAAGGAAAACCAGAATGTGCGCGTCCTCAATCCTGAGCAGCTCATCGCCACCCTCTCTGAGGATCGGGAACTGCGTATGGAGATTGAGGTCCGCATGGGCAAGGGCTATGTGCCCTCCGAGATGCATGAAGGCCTGGACGACGAGATCGGACTCATCACCATGGATGCCAGCTTTTCGCCCGTGCGGAAGGTTGCCTACATGGTCGAGCAGGCCCGTGTCGGCCAGATGACCAACTACGACAAGCTTCTGCTTGAGGTCTGGACCGACGGCTCCCTCTCACCCGAGGATGCCGTTGCGTACAGCGCCAAGATTCTCAAGGACCAGCTCTCCGTGTTCATCAACTTCGACGAGCAGTCCTCGGACAAGAAGAAGAGCGCCGACCTCGATATGGACCTCAATCCGAACCTGCTCAAAAGCATCGACGAGCTTGAGTTGTCCGTGCGCGCCACCAACTGCCTCAAGGCGGCGAACATCGCCTATGTGGGCGAACTGGTGCAGCGTACTGAGGCCGCCATGCTCAAGACCAAGAACTTTGGCCGCAAGTCCCTGGATGAGATCCGCCGCGTTCTGGAGAGCATGGACCTGCGCTTTGGCATGACCGATGAGGTCGTGGAGAAAAAATTCCAGGAACTGCTCAAGAGGAAAGAAAGAAATGAGGCATAA
PROTEIN sequence
Length: 347
MLIQNGDKLINTRNWSELVRPEQLARDPKSSDMYGKFVCEPLERGFATTIGNSLRRVLLSSLQGAAIVAVRIEGVQHEFTTVKGVLEDVTEIVLNLKQVRLAMTSVEPQKLVLEARKKGPVTAAHIKENQNVRVLNPEQLIATLSEDRELRMEIEVRMGKGYVPSEMHEGLDDEIGLITMDASFSPVRKVAYMVEQARVGQMTNYDKLLLEVWTDGSLSPEDAVAYSAKILKDQLSVFINFDEQSSDKKKSADLDMDLNPNLLKSIDELELSVRATNCLKAANIAYVGELVQRTEAAMLKTKNFGRKSLDEIRRVLESMDLRFGMTDEVVEKKFQELLKRKERNEA*