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S15_scaffold_510_curated_21

Organism: S15_Afipia_broomeae_61_15_curated

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: comp(19965..20861)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.9
  • Coverage: 276.0
  • Bit_score: 506
  • Evalue 2.30e-140
shikimate 5-dehydrogenase (EC:1.1.1.25) similarity KEGG
DB: KEGG
  • Identity: 77.0
  • Coverage: 269.0
  • Bit_score: 422
  • Evalue 8.70e-116
  • rbh
Shikimate dehydrogenase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P2P6_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 90.9
  • Coverage: 276.0
  • Bit_score: 506
  • Evalue 1.60e-140
  • rbh

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 897
ATGCGAGATGATCCCGTATCCGGGATCAAATGCGTATGCGGGTTGATCGAACTGGAGCCCTGTTTCGTGAGTGTTACTCCCGCCGCATGTCTGATCGGCTGGCCGGCGGCGCATTCGCGCTCGCCGCTGATCCACAAATACTGGCTGAAATCCTTCGGCATCGACGGCGACTATCGCATCGAGGCAGTGGAGCCGGCGGCGTTCGCGGACTTTATCGGAAATCTTGCGGCGCGCGGCTACAAGGGCGCCAACGTCACCATTCCGCACAAGGAAAAGGCGCTCGCGCTCTCGATGCCCGATGCGCGCGCGCGCGCGGTGGGTGCGGCCAACACGCTCTACTTCAACGGCAGTGAACTGCATTCGACCAACACCGATGTCGAGGGCTTCATCGGCAATCTCGACGCCAGCGCGCCAGGCTGGGACCGCACGGAGGACGTGCTGGTGCTCGGCGCGGGCGGATCGGCGCGCGCGGTGATCTTCGGATTGATCGAGCGTGGCATCAGGCGCGTGCATCTTGCCAACCGCACCGCGTCGCGCGCGCAGTTGCTCGCAGATCAGTTCGGCGCGCGGGTGCAGCCGCTGGCATGGGAGCGGGCCGGCGATGTGCTGCCGCGCGCGGGGCTGCTGGTGAACACCACATCGCTCGGCATGAAGGGCCAGCCGCCGCTCGATATGAACGTCGGCGCGCTCCCGGCAGGCGCGGCCGTCGCCGATCTGGTTTATGTGCCGCTTGAAACCGGGTTGCTGAAAGCGGCGAAGGCGCGCGGCCTGAAAACCGCCGACGGTCTTGGCATGCTGCTGCATCAGGCCGTGCGCGGATTTGAATTGTGGTTCGGCAAGCGTCCCACCGTGACGCCGGAGCTGCGCGCGCTGGTCGAGGCCGATCTCATGAAGTAG
PROTEIN sequence
Length: 299
MRDDPVSGIKCVCGLIELEPCFVSVTPAACLIGWPAAHSRSPLIHKYWLKSFGIDGDYRIEAVEPAAFADFIGNLAARGYKGANVTIPHKEKALALSMPDARARAVGAANTLYFNGSELHSTNTDVEGFIGNLDASAPGWDRTEDVLVLGAGGSARAVIFGLIERGIRRVHLANRTASRAQLLADQFGARVQPLAWERAGDVLPRAGLLVNTTSLGMKGQPPLDMNVGALPAGAAVADLVYVPLETGLLKAAKARGLKTADGLGMLLHQAVRGFELWFGKRPTVTPELRALVEADLMK*