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S15_scaffold_378_curated_29

Organism: S15_Afipia_broomeae_61_15_curated

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: 22530..23078

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P5N3_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 182.0
  • Bit_score: 357
  • Evalue 5.70e-96
  • rbh
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EKS36756.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 182.0
  • Bit_score: 357
  • Evalue 8.00e-96
FecI-like sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 83.0
  • Coverage: 182.0
  • Bit_score: 315
  • Evalue 7.00e-84
  • rbh

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 549
ATGCTGACGCCGGCTGAGTTGATCTGGCTGCTCGCATCGGTTGCGAAGGGGGACGAGGCGGCATTTGAGCGCCTTTACGCTGCCACACGGGCGAAACTCTTTGGCGTGGTGCTCCGTATATTGAGGCGTCAGGATCTTGCCGAGGAGGTGGTCCAGGAAGCCTACGTCAAGATATGGCACAGTGCGGGTCAGTTCAATCCTTCATTGGCTTCTCCGATTACCTGGATGGTTTCGATCGCCCGCAACCGGGCGATCGATGTCGTGCGCAAGCGGAGTGAGACGTCGATCGAAGACGAGCCGGTCGCCATGGAGGTCGCGTCAGATATTCCGGACCCGCTGGCGCGACGGGAAATGACGGAGGAGTTGAAGCGGATTCTGGAGTGTGTCGGGCAACTCGATCCCGAGCGCCAGAAACTTGTGCTGCTGGCTTACTACAATGGATGGAGCCGCGAGCAATTGTCGGAGAAATTCAATACGCCGCTGAACACGGTCAAGACCTGGCTACGGCGCAGCATGATCGAAATTCGCGGATGCCTTGGTTTGGGATGA
PROTEIN sequence
Length: 183
MLTPAELIWLLASVAKGDEAAFERLYAATRAKLFGVVLRILRRQDLAEEVVQEAYVKIWHSAGQFNPSLASPITWMVSIARNRAIDVVRKRSETSIEDEPVAMEVASDIPDPLARREMTEELKRILECVGQLDPERQKLVLLAYYNGWSREQLSEKFNTPLNTVKTWLRRSMIEIRGCLGLG*