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S15_scaffold_392_curated_1

Organism: S15_Afipia_broomeae_61_15_curated

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: 3..1022

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 339.0
  • Bit_score: 645
  • Evalue 2.70e-182
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 93.8
  • Coverage: 339.0
  • Bit_score: 618
  • Evalue 9.40e-175
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Afipia birgiae RepID=UPI00037BC94E similarity UNIREF
DB: UNIREF100
  • Identity: 98.8
  • Coverage: 339.0
  • Bit_score: 647
  • Evalue 3.90e-183

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1020
ACGACCGGCCGTGGCGCGGATCTGCGTCCCGCCATCGTGGTCAAGGGCAAGGATGGCAAGGTGCTGAAGCTGGCGCGTGGCGGTGACGCCCGTTACATGCTTTCGGTGGACGGCATTCTGTCGGTCGACGTTGGTGCCAAGGTCAAGGCGGGCGACATTCTCGCCCGTGTCTCGACGGAAAGCGCCAAGACCCGCGACATCACCGGCGGTCTGCCGCGCGTCGCGGAACTGTTCGAAGCCCGCAAGCCGAAGGATGCCGCGATCATCGCGGAAATCGCCGGCACGATCCGCTTCGGCCGCGACTACAAGAACAAGCGCCGCATTTCGATCGAGCCTGTCGACAAGAACGAGGAGACTCGCGAGTACCTCATTCCGAAGGGCAAGCACATCCATCTGCAGGACGGCGATATCGTCGAAAAGGGCGATTTCATCGTCGAGGGCAATCCGGCGCCGCACGACATCCTGGCGATCAAGGGCATCGAGGAACTCGCTGCCTATCTGGTCAACGAAATCCAGGAAGTTTACCGGCTCCAGGGCGTGCTCATCAACGACAAGCACATCGAGGTGATTGTCCGTCAGATGCTGCAGAAGGTCGAGATCACCGATCAGGGCGAGACCGACATGATCTCGGGCGAGCAGGTCGACAAGATCGAGTTCGATCAGCTCAACGCCAAGGCGAAGGACGAGGGCAAGAAGCCCGCGACCGGAAACCCGGTGCTGCTCGGTATCACCAAGGCCAGCCTGCAGACGCGGTCGTTCTTCTCGGCGGCGTCGTTCCAGGAGACCACCCGCGTGCTCACCGAAGCTGCCGTCAACGGCAAGGTGGACCCGCTGGAAGGCCTCAAGGAAAACGTCATTGTCGGCCGCCTGATCCCGGCCGGCACCGGCGCCTCGATGGCGAAGATCCGCGAAGTCGCAACCAAGCGCGACAAGCTGATCCTCGACGAGCGCGAGAAGCAGGCGGCGATTACGCCGGCCGCTCCGGAAGCGGAGCCGCTGGCTCTGCCGCCGGCGGAATAA
PROTEIN sequence
Length: 340
TTGRGADLRPAIVVKGKDGKVLKLARGGDARYMLSVDGILSVDVGAKVKAGDILARVSTESAKTRDITGGLPRVAELFEARKPKDAAIIAEIAGTIRFGRDYKNKRRISIEPVDKNEETREYLIPKGKHIHLQDGDIVEKGDFIVEGNPAPHDILAIKGIEELAAYLVNEIQEVYRLQGVLINDKHIEVIVRQMLQKVEITDQGETDMISGEQVDKIEFDQLNAKAKDEGKKPATGNPVLLGITKASLQTRSFFSAASFQETTRVLTEAAVNGKVDPLEGLKENVIVGRLIPAGTGASMAKIREVATKRDKLILDEREKQAAITPAAPEAEPLALPPAE*