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S15_scaffold_1107_curated_8

Organism: S15_Afipia_broomeae_61_15_curated

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: 6981..8177

Top 3 Functional Annotations

Value Algorithm Source
ligand-gated channel protein n=1 Tax=Afipia birgiae RepID=UPI000313F78A similarity UNIREF
DB: UNIREF100
  • Identity: 88.1
  • Coverage: 403.0
  • Bit_score: 703
  • Evalue 9.30e-200
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS40284.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.8
  • Coverage: 407.0
  • Bit_score: 682
  • Evalue 3.10e-193
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 68.6
  • Coverage: 401.0
  • Bit_score: 572
  • Evalue 7.00e-161
  • rbh

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Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1197
ATGTTTTCCGTTTCAAGACGGGCGCGCAGCATTTTGCTGGCGTCCGCGTCAATCGCTGCTGCGATCCCCGTCACGCAATCCGACGCGCAAACCGCGCCCCCGCAAACTCTCCCAACAGTCAATGTTGAGGCGGAAAGGCAGCCTCGCCCGGCGCGAAGCCGCATCGTCATACCAACCCGCGCTGCGCAGAGTCCGGCACCTGCCGTGCCTGAACAGCTCGGCGTCAAAACCGCCGATCAGGCCCGCCAGGAGATTCAGCAGACGCCCGGCGGCGTCGCGATCGTTTCCGCGGAGGACTACAAGAACAACTCCGTCGCCAGCACGATCAAGGATGTCCTCGGCTATGTGCCCGGCGTCTTCGCGCAGCCGAAATGGGGCGACGACACCCGCCTCTCGATTCGCGGCTCGTCCCTGTCGCGCAACTTCCATCTGCGCGGCGTCCAGCTTTACATGGACAGCATCCCGATCAACACGTCCGACGGCTACGGTGATTTCCAGGAAATCGATCCGACCGCTTACAAGTATGTCGAGGTCTACAAGGGCGCGAACGCCTTGCAGTTTGGCGCCAACTCGCTCGGCGGCGCGATCAATTTCGTGACCCCGACCGGCCGCGACGCCAAGGTGAACAGCGCAGGCATCGACATGGGCGCGTTCGGCTATCGCCGCTTCCAGGGCAGCGTCGGCGGCGCCAACGGTCCGTGGGACGCTTTCTTCACGGCGTCGAACCAGAGCGCCGAGGGCTTCCGCGATCACAGCTACGGCCACTCGACCCGCGCCAGCGGCAACATCGGCTATCAGTTCTCGCCCGACTTCGAGACGCGCTTCTACATCAACGCCAATGACATCCGTCAGCGCATTCCGGGATCGGTGACACGAGCATCGGCTCTCACCTCTCCCGAGACGGCAGCTGCGGGCAACGTCATCAACGACCAGCAGCGCAACATCGACAGCGGACGGATCGCCAACAAAACGACAATCCGGTTCGGCGCGACCACGGTGGAGTTCGGTGCCTTCGCGGTGGACCGCCACCTGATGCACCCGATCTTCCAGTGGCTGGACTATCAGTACAAGGATTACGGTGGCTTCGGCAAAGTCACCGATGACCGGATCATCGGCGGCTTCCGCAACCGGCTGGTCGCAGGCGTCAATGTCGTCAACGGCGAGATCGACAACAAGCAGTATCAGAACATCGGCGGC
PROTEIN sequence
Length: 399
MFSVSRRARSILLASASIAAAIPVTQSDAQTAPPQTLPTVNVEAERQPRPARSRIVIPTRAAQSPAPAVPEQLGVKTADQARQEIQQTPGGVAIVSAEDYKNNSVASTIKDVLGYVPGVFAQPKWGDDTRLSIRGSSLSRNFHLRGVQLYMDSIPINTSDGYGDFQEIDPTAYKYVEVYKGANALQFGANSLGGAINFVTPTGRDAKVNSAGIDMGAFGYRRFQGSVGGANGPWDAFFTASNQSAEGFRDHSYGHSTRASGNIGYQFSPDFETRFYINANDIRQRIPGSVTRASALTSPETAAAGNVINDQQRNIDSGRIANKTTIRFGATTVEFGAFAVDRHLMHPIFQWLDYQYKDYGGFGKVTDDRIIGGFRNRLVAGVNVVNGEIDNKQYQNIGG