ggKbase home page

S15_scaffold_0_curated_4

Organism: S15_Bacteroidales_43_45_curated

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 4623..5546

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.3
  • Coverage: 300.0
  • Bit_score: 421
  • Evalue 5.80e-115
Pseudouridine synthase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0H7_PALPW similarity UNIREF
DB: UNIREF100
  • Identity: 69.3
  • Coverage: 300.0
  • Bit_score: 421
  • Evalue 4.10e-115
  • rbh
pseudouridine synthase, rlua family similarity KEGG
DB: KEGG
  • Identity: 69.3
  • Coverage: 300.0
  • Bit_score: 421
  • Evalue 1.20e-115
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Paludibacter propionicigenes → Paludibacter → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 924
ATGAGAAAGAAAATTGACTATGTACCACCCGCAAAGCCCACCGTATTGAAGGTAAAAGAGGAATCAGATTTGATGACTTTTTTACTTGCCAAGATGGGTGGCATGAAACGTAACTCTGTAAAACAGCTATTGGCACACCGCCAGGTAATGATAAATAATCAGGTAGTTACCCTCTTCAGTACTCCCGTGAAAGCAAACGATATAGTGGAGATCAAGAGTTCAAGGGGAATCACTGAATTGAATCACCCCAAGCTTCGTATTATCTTTGAAGATCATTTCCTGATTGTGGTTGAGAAAAGCGAGGGTTTGCTGACTGTTAGCACCGGTAAGACCGAAGAAACCACTGCCTTTTCTATCCTGAAGACGCATGTGAAAGTGGCTGCTCCCACCAATCGAATTTATGTGGTACACCGACTCGATCGTGAAACCTCGGGTGTGTTGATCTTTGCCAAAAGCAGGGATGTGCAGTTGTATCTGCAGGAGCACTGGCACACAATCGTAACCCGACGTGTGTATGTGGCCCTGGTCGAAGGCAAGGTAGAGAAAGAAAAAGACACCATTGTAAGCTGGCTATCAGAGCATGAGAAATCGCTAAAGATACGCTCCAGTGCATTTGACAACGGCGGTCAGCAGGCTATCACCCACTACCGCCGCATCAAATTCAATGATCAGCTTTCGCTGTTGGAGTTGGAATTAGAAACCGGTCGGAAGAACCAGATACGCGTGCACATGCAGAGTATCGGGCATCCTATCACCGGCGACAAGAAATACGGATCCGACATCAATCCATTGGGACGGGTTGGACTGCATGCACGCATGATCAGTTTCAAACATCCTGAGACAGGTGAGGTCTTACATTTCGAGACTCCCGTTCCCCGTTCGTTTCTGAAATTCTTTCATCAACCTTCAAACTCCATTAAGTAG
PROTEIN sequence
Length: 308
MRKKIDYVPPAKPTVLKVKEESDLMTFLLAKMGGMKRNSVKQLLAHRQVMINNQVVTLFSTPVKANDIVEIKSSRGITELNHPKLRIIFEDHFLIVVEKSEGLLTVSTGKTEETTAFSILKTHVKVAAPTNRIYVVHRLDRETSGVLIFAKSRDVQLYLQEHWHTIVTRRVYVALVEGKVEKEKDTIVSWLSEHEKSLKIRSSAFDNGGQQAITHYRRIKFNDQLSLLELELETGRKNQIRVHMQSIGHPITGDKKYGSDINPLGRVGLHARMISFKHPETGEVLHFETPVPRSFLKFFHQPSNSIK*