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S15_scaffold_942_curated_5

Organism: S15_RifleAAC_Geothrix_68_9_curated

near complete RP 43 / 55 MC: 1 BSCG 43 / 51 ASCG 10 / 38 MC: 1
Location: comp(6397..9807)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=698389 species="Bacteria; environmental samples.;" source="uncultured bacterium 293.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.2
  • Coverage: 1127.0
  • Bit_score: 761
  • Evalue 1.10e-216
Transcription-repair-coupling factor n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P0K3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 76.6
  • Coverage: 1129.0
  • Bit_score: 1716
  • Evalue 0.0
  • rbh
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 41.0
  • Coverage: 1172.0
  • Bit_score: 755
  • Evalue 1.70e-215
  • rbh

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Taxonomy

uncultured bacterium 293 → Bacteria

Sequences

DNA sequence
Length: 3411
ATGAATGCTGTCGGCCCTGACCTGAACGATCTCCTGCGCTTGGCCGAGGCCCCTGCGGATGTCCTCACCGCCCCCGGTGCGCGCCTCCGCTGGACCACCCCCCCGGCCCTGGCCCTGATCCTGGCCCGCTGGATCACCCGCGGGGGCCGCATCCAGTCCCTGTGGGTGGACGCGCCCACGGAAGCCGAGGCCCGCACCCTGGCCCAGGACCTCCAGGCCCTGCTGCCCGAGGCGGGCGTGGCCCATTTCCCGGGCTTCGCGCCCTATGCCGGGGGCGAGAGCAGCCCGCCGGGCATGGTGCTGCGGGACCGGCTGTCGGCCCTGGTGGGCCTGCTGGAGCGCCGGGTCCAGGTGCTGGTGACGGGGCCCCTGGCCGCCTGCGAGAAGCTGCCCCACCCCACCTGGTTCCAGAAACAGAAGCTGGAACTGAGAACCGGCGCCGAGGTGCCCCGGGAGCTGCTGCTGGAGACCCTGATCGCCCTGGGCTACCGCCGCACGGAGATGGCCTCGGCCCCGGGCGAGTTCAGCTCCCGCGGCATGGTGGTGGACCTGTGGCCCGACCACCTGGCCCAGCCCCTGCGCCTGGAGACCTTCGGCGACGAGCTGGAGCGCTTGTCGCCCTTCGACCCCGACACCCAGCGCCGCACGGGCGAATCGCTGGAATCGCTCACGCTCTATCCCCGCTTCGAAGGCGACCGCGGCGATGGCCAGGCCCTGCTGGACGCCGTGGCCTCCCGGGCGGATCGCACGCCGGAACCCGGGGACGATCTGGCCTTCCGCCGGGCGCGGCTGGCCACCCACGGCCACTTCCCAGGCGAAGAGCTGTTCCATCCGCTGCTGGCCCAGCCCAAGGGCCAGCTGACCCACTGGGTGCCGCCCTGCCTGCGCGTCCGCCTGGAGGGCGCCTGGGAAGAGGCCCTGCGCGAGGCCGAACGCTCCCGCATCGAGGAGGGCCTGGCGGCCCTGCGCCGGGGCGGCGTGGTCTGCCCGGATTTCGAGGACCGCTTCCTGCCCACGGATCCCAGCCGGCCCACTTTCCACCTCACCGAGTGGCAGAGCGAGGCCACCGTGCCCCTGGCGGCCCTGCCCCTGAAGGAGTTCCAGGGGCGCCTGGCGGACCTGGCCGCCCACGCGCAGGAGCTGGCGCTCACGGGCCACCGGGTGTTCCTGGCGGGCTCCACGCCGGGCATGAAGGGCCGCTTCGCGGAGTTCCTCCGGGACTACGACCTGCCCCAGGCCTACGGCACCGAGACCGGCTGCCGGGCCCTCCAGCTCTCCCTGAGCGCCGGCGTCCACCTTAAGGAGCCTGCCCTCGTCATCTTCACCGAGCGCGAGATCTTCGGCCGCAAGGCCGTGCAGGCGGCGCCCAAGAAGTCCCGCAGCGCGGCCTTCCTGTCGGATCTGCGGGACCTCAAGCCCGGCGACCGGGTGGTGCACCTGGACCACGGCATCGGCGAGTTCGTCGGCTTCGCCACGCTCACCGTGGGCGGCGAGGAGCAGGAGGTGTTGCAGCTCCGCTACGCGGACGGCGGCCAGCTGAACGTGAGCCTCGAGCGGGCCGACCTCATGCAGCGCTACACCGGCGCCGAGGGCCACCTGCCGCCCCTGGACAAGCTGGGCGGCGCCAGCTGGGCCAAGGTCAAGCGCAAGGCCAAGAAGGCCATCCGCGACATGGCCGACGAGCTGCTGAAGCTCTACGCCCTGCGCAAGCTGGAGAAGGGCCATGCCTACCCGCCGGACGGGCCGGACATGGCGGCCTTCGAAGCCAGCTTCCCCTTCACGCCCACGCCGGACCAGGTCGAGGCCACGGAGGCCGTGAAGGCGGACCTGGAATCCCCGCGCCCCATGGACCGCCTGCTGGTGGGCGATGTGGGTTTCGGGAAGACCGAAGTGGCCATGCGCGCCGCGGCGAAAGTCGCGCTCGAAGGCCGCCAGGTGGCCGTGCTGTGCCCCACCACCGTGCTCTGCTTCCAGCACTTCCGCACTTTCAAGGAGCGGTTCGCGGGCTTCCCCATCCGCATCGAGATGCTGAACCGTTTCGTGGATGCCGCCGACCAGAAGCGCATCCTCCAGGAGGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCCAGATGCTGGGCGCCAAGGTGAAGTTCGCCGACCTGGGCCTGGTGGTCATCGACGAGGAGCAGCGCTTCGGGGTGGGCCACAAGGAGAAGCTGAAGAAGCTGCGCCTCAACGTGGACCAGCTGGCCCTCAGCGCCACGCCCATCCCCCGCACCCTGCACATGAGCCTCACGGGCCTGCGCGAGATCAGCCTCATCGAGACGCCGCCCAAGGACCGGCTGGCCATCGAGACCGTGGTGGCGCCCTGGAGCGACGAGCTGGTGCAGACCGCCATCCAGTTCGAGCTGCGCCGCGGCGGCCAGGTCTATCTGGTGCACAACCGCGTGGAATCCATCGTCAGCATTGCGGCGCGGGTGCGTGAGCTGGTGCCGGATGCCCGGGTGGGCGTGGGCCACGGCCAGCTGACGGACGAGGGCCTGGAACAGGTGATGGTCGGCTTCATGGAGGGCCGCATCGACGTGCTGGTGGCCACCACCATCGTGGAGAACGGCCTGGACGTGCCCAACGCCAACACGCTCATCGTCCACAGGGCTGACGCCTTCGGCCTCAGCCAGCTCTACCAGCTGCGGGGGCGCGTGGGCCGCAGCGACGTGCCCGCCTACGCCTACCTGCTCATCCCGCCCAAGCACGAGATCAGCGAGGACGCCCGCAAGCGGCTCCAGGCCCTGGAGGATTTCTCGGAGCTGGGCTCAGGCTTCCGCGTGGCGGCCATGGACCTGGAACTGCGCGGCGCGGGGAACCTGCTGGGCGGCGAGCAGTCCGGCCACATCCACGACATCGGCTTCGAGCTCTACGTGAAGCTGCTGGAGGAGACGCTGTCGGAGCTGCAGGGCCAGCCCAGCGGCACCTTCGAGGTGAAGCTCGACCACCTGGCCCCCGGCGCCCAGCTGAGCCGCCGCTGGATCGACCAGGCCGCCGAGCGCCTGGTGGCCTACAAGCGCATCTCGCGGCTGCGGGAGGAGAAGGACCTGGAGCTCTACAGGCTGGACCTGGAGGACCGCTTCGGCCGCATTCCCGAGGACGACCCGGACACGCTGCGGTTCTTCGAGCTGCTGAAGGTGAAGCTGCGGGCCCAGGTCCTGGGCGTGTCCGAGGTGGCCGTGGAGAAGGGCCAGCTCAAGCTCCGCCTCAGCCCCCAGACCGCCCTGGATCCCGCGAAGCTCATGGCCTGGGTGGGCCAGCAGAAGGGCGCCAGCCTCAGCCCCGACGGCGCCGTGCGCCTGCCCCTGCTGGGCACCCAGGACGATCCCGTGCTCCAGGCCCAGGGCGTGTTGGCGGCCTGGGCCGGGCTGGGCTGA
PROTEIN sequence
Length: 1137
MNAVGPDLNDLLRLAEAPADVLTAPGARLRWTTPPALALILARWITRGGRIQSLWVDAPTEAEARTLAQDLQALLPEAGVAHFPGFAPYAGGESSPPGMVLRDRLSALVGLLERRVQVLVTGPLAACEKLPHPTWFQKQKLELRTGAEVPRELLLETLIALGYRRTEMASAPGEFSSRGMVVDLWPDHLAQPLRLETFGDELERLSPFDPDTQRRTGESLESLTLYPRFEGDRGDGQALLDAVASRADRTPEPGDDLAFRRARLATHGHFPGEELFHPLLAQPKGQLTHWVPPCLRVRLEGAWEEALREAERSRIEEGLAALRRGGVVCPDFEDRFLPTDPSRPTFHLTEWQSEATVPLAALPLKEFQGRLADLAAHAQELALTGHRVFLAGSTPGMKGRFAEFLRDYDLPQAYGTETGCRALQLSLSAGVHLKEPALVIFTEREIFGRKAVQAAPKKSRSAAFLSDLRDLKPGDRVVHLDHGIGEFVGFATLTVGGEEQEVLQLRYADGGQLNVSLERADLMQRYTGAEGHLPPLDKLGGASWAKVKRKAKKAIRDMADELLKLYALRKLEKGHAYPPDGPDMAAFEASFPFTPTPDQVEATEAVKADLESPRPMDRLLVGDVGFGKTEVAMRAAAKVALEGRQVAVLCPTTVLCFQHFRTFKERFAGFPIRIEMLNRFVDAADQKRILQEXXXXXXXXXXXXXQMLGAKVKFADLGLVVIDEEQRFGVGHKEKLKKLRLNVDQLALSATPIPRTLHMSLTGLREISLIETPPKDRLAIETVVAPWSDELVQTAIQFELRRGGQVYLVHNRVESIVSIAARVRELVPDARVGVGHGQLTDEGLEQVMVGFMEGRIDVLVATTIVENGLDVPNANTLIVHRADAFGLSQLYQLRGRVGRSDVPAYAYLLIPPKHEISEDARKRLQALEDFSELGSGFRVAAMDLELRGAGNLLGGEQSGHIHDIGFELYVKLLEETLSELQGQPSGTFEVKLDHLAPGAQLSRRWIDQAAERLVAYKRISRLREEKDLELYRLDLEDRFGRIPEDDPDTLRFFELLKVKLRAQVLGVSEVAVEKGQLKLRLSPQTALDPAKLMAWVGQQKGASLSPDGAVRLPLLGTQDDPVLQAQGVLAAWAGLG*