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S15_scaffold_320_curated_1

Organism: S15_RifCSP_Pseudomonas_62_25_curated

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(1..126)

Top 3 Functional Annotations

Value Algorithm Source
Rhs element Vgr protein n=1 Tax=Pseudomonas sp. GM80 RepID=J2X0F1_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 81.0
  • Coverage: 42.0
  • Bit_score: 70
  • Evalue 4.20e-10
type IV secretion protein Rhs similarity KEGG
DB: KEGG
  • Identity: 81.0
  • Coverage: 42.0
  • Bit_score: 70
  • Evalue 1.20e-10
Rhs element Vgr protein {ECO:0000313|EMBL:EJN24497.1}; TaxID=1144339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM80.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.0
  • Coverage: 42.0
  • Bit_score: 70
  • Evalue 5.90e-10

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Taxonomy

Pseudomonas sp. GM80 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 126
ATGCGTCAAAGGGATTTGCAGTTCACGTTTTCCGTGCTGACCGCACAGGTGGCGTTCGAGGTTGTCGAGTTCACCCTGGAAGAAGCCTTGTCCGAGCCTTTTCGCCTGACGCTCGAACTGGCCAGC
PROTEIN sequence
Length: 42
MRQRDLQFTFSVLTAQVAFEVVEFTLEEALSEPFRLTLELAS