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S15_scaffold_320_curated_7

Organism: S15_RifCSP_Pseudomonas_62_25_curated

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(7737..8240)

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion protein n=1 Tax=Pseudomonas chlororaphis subsp. aurantiaca PB-St2 RepID=V8DG11_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 78.2
  • Coverage: 165.0
  • Bit_score: 252
  • Evalue 1.80e-64
type VI secretion protein similarity KEGG
DB: KEGG
  • Identity: 77.0
  • Coverage: 165.0
  • Bit_score: 250
  • Evalue 3.30e-64
Type VI secretion lipoprotein TssJ2 {ECO:0000313|EMBL:EJK98507.1}; TaxID=1038921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas chlororaphis subsp. aureofaciens 30-84.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.4
  • Coverage: 165.0
  • Bit_score: 250
  • Evalue 1.30e-63

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Taxonomy

Pseudomonas chlororaphis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 504
ATGTCTCGCCGTACCCACCCATTACTCAAGGCCCTGACGCTGCTCATGGCCTTGGCGCTGTTGACCGGCTGCGCATCGATGTCGCCGTATTCGACCCTGACCAAGCTGAATCTGAAGCTCAGTGCCAGCGACCGGCTCAACCCCGACCTCAATGGGCGTGCGTCGCCGATCGTGGTGCGGTTGATGGAACTCAAGCATCCCGTCGCGTTCGAGAACGCCGATTTTTTCAGTCTCTACGAGCGCGCCAGGGAGTCCCTGGCACCGGATCTGGTGGCCAGTGAAGAGCTGGAGTTGCGCCCGGGGGAAAGCCTCGAATTCAAGTTGCGGGTTGAGGACGGGAGCCGTTTCGTCGGCGTGCTTGCGGCTTATCGTGATTTGCCGGAAAGCCAGTGGCGTTATGTGGTGCAGCTCACCCCGCAGGAGGTGACCGAGGTCGGCCTGATCCTTGACCAGTCCGGCATCCGCAACAGCAACGATGTGTCCACCCAAGCGGATGACAATTGA
PROTEIN sequence
Length: 168
MSRRTHPLLKALTLLMALALLTGCASMSPYSTLTKLNLKLSASDRLNPDLNGRASPIVVRLMELKHPVAFENADFFSLYERARESLAPDLVASEELELRPGESLEFKLRVEDGSRFVGVLAAYRDLPESQWRYVVQLTPQEVTEVGLILDQSGIRNSNDVSTQADDN*