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S15_scaffold_320_curated_10

Organism: S15_RifCSP_Pseudomonas_62_25_curated

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(9693..11210)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains n=1 Tax=Pseudomonas sp. GM17 RepID=J2M8N7_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 86.3
  • Coverage: 503.0
  • Bit_score: 862
  • Evalue 2.00e-247
  • rbh
Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains {ECO:0000313|EMBL:EJM01151.1}; Flags: Precursor;; TaxID=1144323 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM17.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.3
  • Coverage: 503.0
  • Bit_score: 862
  • Evalue 2.80e-247
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 86.5
  • Coverage: 503.0
  • Bit_score: 860
  • Evalue 1.20e-247

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Taxonomy

Pseudomonas sp. GM17 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1518
ATGTTCACTCGGGTGCCGCAGCCGCTGGCCTATGCAGAGGCACTGCTGGCGCAATTCTCCGCTTTGTCCCGGGCGGCGCAAGGCGCTGTGCTGCTTGAAGACTTTGTGCGAGGCGCAGCACAGCTCAGTGGCTGTGAACTGAGTCAGCTGTATCTGCTCGATGCCACCCATAGCTGCCTGCAACTGCGCGCCGAATGCCTCGGCGGCCTTTTACAACCGCGGGAAGTGATCAGCCTGCCGAGCGATTACAGCGGTGAGCAGCTACTGCAGTTTGCCCTGTGCCAGAACCGGGTGGTGAGCCTGGTGGGTCTGAACCACAGCCTCCACGACACCAGCTTCCTGCCCGTGCACAGCGCTGCGTGGCAGTCACTGTTATGCGTACCGCTGGTCAACGCGCGCAAGGCTGTCGAAGGCTTGCTGTTGTGTGCCAGCCCGCAACAGCAAGACCTGCAAGCCTTTGCCCAGTCGTTGGGCCAACTGGGGGCGTTTGTCCTTGGACAATGGGCGTTGCTCCAGCGTTTGCGTCTGCCCGCGGGCGAGCCTGCGCCGCTTCTGCCCCCCGAGGTCATCACCAGTGGTTATGGTCTGATCGGCACCAGTCCGGCGATGCGCCAGGCCTATCAGTTGATCAGCAAGGTACTGCACAGCCCTTACACCGTGTTGCTGCGTGGCGAAACCGGTACCGGCAAGGAAGTGGTGGCGCGTGCCATTCATGATTACGGCCCGCGTCGTTCCCAGGCATTTGTGGTGCAGAACTGCGCGGCGTTTCCGGAAAACCTGCTGGAAAGCGAGTTGTTCGGTTATCGCAAGGGGGCGTTCACGGGCGCTGACCGCGATCGCCCTGGACTGTTTGATGCGGCCAATGGCGGCACTTTGTTGCTGGACGAAATCGGCGACATGCCGCTGTCCCTGCAAGCCAAATTGCTTCGGGTCCTGCAGGACGGCGAGATCCGCCCGTTGGGCTCCAACGACACGCACACCATCGACGTGCGGATCATCGCCGCCACCCACCGCGATCTGGCGGCGCTGGTGGGCGAAGGCAAGTTCCGTGAGGACCTGTATTACCGCCTGGCTCAGTTCCCGATCGAGTTGCCGGCTTTGCGACAGCGTGAAGGCGACATTCTCGACCTGGCCCGGCATTTCGCCGACAAGGCCTGTGCCTTCCTGCAAAAGGACCCGGTGAGCTGGTCGCCGACGGCCCTCAATCATCTGTCCGGTTACGCCTTTCCAGGCAACGTGCGCGAGCTCAAGGGGCTGGTGGAGCGTGCAGTGCTGCTCTGTGAAGACGGTGAACTGATGGCCGAGCATTTCTCCCTGAACGTTGAAGTCATGCCCGAAGAGCCGGGTCTGAACCTGCGCGAGCAGTTGGAAAAAGTCGAACGCCACCTGTTACTCGATTGCCTGCGCAAGAACGACGGCAATCAGACCCTGGCGGCCCGGGAGCTGGGATTGCCCCGTCGCACGCTGCTGTACCGCCTGGGGCGCCTGAACATCAATCTTGACGACTTTGTGGTCTAG
PROTEIN sequence
Length: 506
MFTRVPQPLAYAEALLAQFSALSRAAQGAVLLEDFVRGAAQLSGCELSQLYLLDATHSCLQLRAECLGGLLQPREVISLPSDYSGEQLLQFALCQNRVVSLVGLNHSLHDTSFLPVHSAAWQSLLCVPLVNARKAVEGLLLCASPQQQDLQAFAQSLGQLGAFVLGQWALLQRLRLPAGEPAPLLPPEVITSGYGLIGTSPAMRQAYQLISKVLHSPYTVLLRGETGTGKEVVARAIHDYGPRRSQAFVVQNCAAFPENLLESELFGYRKGAFTGADRDRPGLFDAANGGTLLLDEIGDMPLSLQAKLLRVLQDGEIRPLGSNDTHTIDVRIIAATHRDLAALVGEGKFREDLYYRLAQFPIELPALRQREGDILDLARHFADKACAFLQKDPVSWSPTALNHLSGYAFPGNVRELKGLVERAVLLCEDGELMAEHFSLNVEVMPEEPGLNLREQLEKVERHLLLDCLRKNDGNQTLAARELGLPRRTLLYRLGRLNINLDDFVV*