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S15_scaffold_320_curated_11

Organism: S15_RifCSP_Pseudomonas_62_25_curated

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(11221..13863)

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion ATPase, ClpV1 family n=1 Tax=Pseudomonas sp. GM17 RepID=J3DXY4_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 88.6
  • Coverage: 884.0
  • Bit_score: 1502
  • Evalue 0.0
  • rbh
Type VI secretion ATPase, ClpV1 family {ECO:0000313|EMBL:EJM01152.1}; TaxID=1144323 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM17.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.6
  • Coverage: 884.0
  • Bit_score: 1502
  • Evalue 0.0
ATPase AAA similarity KEGG
DB: KEGG
  • Identity: 88.7
  • Coverage: 884.0
  • Bit_score: 1497
  • Evalue 0.0

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Taxonomy

Pseudomonas sp. GM17 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2643
ATGATCAACCTAGACCTGCAACAACTTATCCAGGCACTGGACGCTGAAACCCGCCGCGACCTGGAGCGTTCCGCTGAGCGCTGCGTCGCCCGTGGCGGCAACAAGGTGCTGGTCGAAGACCTGCTGCTGGGTTTGCTGGAGCGTCCCCAGGGTCTGCTTGCCCGGGCGTTGCAGGACGCGCAAGTCGAGGCCGGCGAGTTGATTGAGGCACTGCAATCGCAAGTCGGCGATGGCGGCTCGCGCAGCCCGGTATTCGCTCCGGAACTGGTGCAGTGGCTGCAGGACGCATTACTGGTGGCCAATCTTGAACTGGGTCAAAGCCAGGTCGAGCAGGCGGCCTTGATTCTGGCCTTGCTGCGCAACCCGATGCGTTATGCCGGCAGTCGCTACCAGTCGTTGCTGGCGAAGCTGGACATCGAACGCCTGAAGGATTTTGCCCTGTCACAACAGCAACGAACCTCCAGCGGCGGGCCGGCGGCAGCGGGGGAGTCGCTGTTGCAGCGTTTCACTCATAACCTCACCCAACAGGCGCGAGACGGCCAGCTCGACCCGGTGCTGTGCCGCGACGATGCGATCCGGCAGATGGTCGACATCCTCGCCCGTCGCCGCAAGAACAACCCGATTGTGGTCGGTGAGGCCGGTGTCGGTAAAACCGCGGTCGTCGAAGGCCTGGCCTCGCGCATCGCCGCCGGAGAAGTACCGCCCGTGCTCAAGGACATTGAGCTGCTCTCGCTGGACATGGGGCTGCTGCAAGCGGGCGCCAGCGTCAAAGGTGAATTCGAGCGACGCCTCAAAGGGGTGATTGACGAGGTCAAAGCCTCGCCCAAACCGATCATCCTGTTCATCGATGAGGCTCATACCCTGATCGGCGCGGGCGGCAATGCCGGAGGCTCCGATGCGGCCAACCTGCTCAAGCCGGCCCTGGCCCGCGGTGAGCTGCGTACCATTGCGGCCACCACCTGGAGCGAATACAAAAAATACTTCGAGAAAGATCCGGCCCTGGCCCGGCGTTTCCAACCCGTGCAATTGCACGAACCCACCGTTGCCGAGGCGGTGACCATTCTGCGAGGCCTGGCCCAGGTCTATGAGAAGAGCCACGGTATCTACCTGCGTGATGACGCAGTGGTGGCCGCCGCGGAGCTCTCGGCCCGCTACCTCGCCGGGCGCCAATTGCCGGACAAGGCCGTCGATGTCCTCGACACTGCCTGTGCCCGGGTTCGCATCAGCCTTGCAGCGGCACCTGAGCGTCTGGAGCGTCTGCGTGGTGAGTGTGCTGAGGGACGGCGTCAGTGCCAGGCTCTGCGGCGCGACGCCGAAGCCGGACTGAAGATCGACCAGGAGGTCCTGGACAGCCTGGAAGCGCGGCTGGCCGATGCCGCGGAGCAACAGCAGGCCCTGGAAACACTCTGGCATGAGCAACGCACATTGGCCGAGCGCCTGCTGCAGTTACGTGTGCAATTGGCCAGGGCCCGCGACGCCAGCCCCCTGCGCTCGACACAGGACAGCGAAGGCTCGCCGGATGCCGGCCGGGAGACTGATGTACAAGCCGGGCCTGGCGTGGTGGAGTTGGAGTCGGCGCTCAACGACACCCATCGCGCCCTGAGTGAGGCACAAACCCGGGAGCGCCTGGTCAGTTTCGAGGTGTGTCCACGCCTGGTGGCTGAAGTCATCAGCGCCTGGACCGGCGTACCGCTGGCGCAACTGGCCCGTGAGCACAACGCCAAGGTGGCGAGTTTCGCCACTGACCTGAGTGCCCGTATTCGCGGTCAGGACCAGGCGGTACAGGTTCTGGATCGTTCGATGCGTGCCGTGGCCGCAGGCCTGAATAAACCAGACGCACCAGTCGGCGTATTTCTCCTGGTGGGCCCCAGCGGTGTGGGCAAGACCGAAACCGCCCTGGCCCTGGCAGACCTGCTGTATGGCGGTGAGCGTTTCATCACCACCATCAACATGTCCGAGTTCCAGGAGAAACACACCGTTTCACGCTTGATTGGCGCTCCGCCGGGTTATGTCGGCTATGGCGAAGGCGGCATGCTCACCGAAGCGGTGCGGCAAAAACCCTACTCCGTGGTGCTGCTCGATGAAGTCGAGAAAGCCGACCCGGATGTGCTCAACCTGTTCTATCAGATCTTCGACAAGGGCGTGGCCAACGATGGCGAAGGGCGTGAGATCGATTTTCGCAACACGCTGATACTGATGACCTCGAACCTGGGCAGCGAGCGGATCAGCGCGCTGTGCGAGAACGGCGAGCGCCCGAGTGTCGACACCCTGGAGCAGACGATCCGTCCGGTATTGAGCAAGCATTTCAAACCGGCGCTGCTGGCACGTATGCGCGTGGTGCCTTATTACCCGGTGAGTGGCCCGGTGCTGCGTGAACTGATCGAAATCAAGCTGGAGCGACTGGGTGAGCGGCTGAACGCTCGGCAGCTGGAGTTCAGTCACTGCCAGGCGTTGGTCGATCACTTGGCCGAACGCTGTACTCAGAGCGAAAGCGGTGCACGCCTGATCGACTACTTGCTCGACCTGCACGTCCTGCCGTTGGTGGCCGACCGCCTGCTGGCGGCCATGGCCACCGGCGAGAACCTCAAACGTGTGTACGCAACGCTCGATAGCAGCGGTGGCGTGGCCTGCGAGTTCGCCTGA
PROTEIN sequence
Length: 881
MINLDLQQLIQALDAETRRDLERSAERCVARGGNKVLVEDLLLGLLERPQGLLARALQDAQVEAGELIEALQSQVGDGGSRSPVFAPELVQWLQDALLVANLELGQSQVEQAALILALLRNPMRYAGSRYQSLLAKLDIERLKDFALSQQQRTSSGGPAAAGESLLQRFTHNLTQQARDGQLDPVLCRDDAIRQMVDILARRRKNNPIVVGEAGVGKTAVVEGLASRIAAGEVPPVLKDIELLSLDMGLLQAGASVKGEFERRLKGVIDEVKASPKPIILFIDEAHTLIGAGGNAGGSDAANLLKPALARGELRTIAATTWSEYKKYFEKDPALARRFQPVQLHEPTVAEAVTILRGLAQVYEKSHGIYLRDDAVVAAAELSARYLAGRQLPDKAVDVLDTACARVRISLAAAPERLERLRGECAEGRRQCQALRRDAEAGLKIDQEVLDSLEARLADAAEQQQALETLWHEQRTLAERLLQLRVQLARARDASPLRSTQDSEGSPDAGRETDVQAGPGVVELESALNDTHRALSEAQTRERLVSFEVCPRLVAEVISAWTGVPLAQLAREHNAKVASFATDLSARIRGQDQAVQVLDRSMRAVAAGLNKPDAPVGVFLLVGPSGVGKTETALALADLLYGGERFITTINMSEFQEKHTVSRLIGAPPGYVGYGEGGMLTEAVRQKPYSVVLLDEVEKADPDVLNLFYQIFDKGVANDGEGREIDFRNTLILMTSNLGSERISALCENGERPSVDTLEQTIRPVLSKHFKPALLARMRVVPYYPVSGPVLRELIEIKLERLGERLNARQLEFSHCQALVDHLAERCTQSESGARLIDYLLDLHVLPLVADRLLAAMATGENLKRVYATLDSSGGVACEFA*