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S15_scaffold_320_curated_12

Organism: S15_RifCSP_Pseudomonas_62_25_curated

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(13877..14884)

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion protein n=1 Tax=Pseudomonas chlororaphis subsp. aurantiaca PB-St2 RepID=V8DG05_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 92.2
  • Coverage: 335.0
  • Bit_score: 624
  • Evalue 6.00e-176
  • rbh
type VI secretion protein similarity KEGG
DB: KEGG
  • Identity: 92.2
  • Coverage: 335.0
  • Bit_score: 625
  • Evalue 5.80e-177
Uncharacterized protein {ECO:0000313|EMBL:AJO81489.1}; TaxID=1611770 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. MRSN12121.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.2
  • Coverage: 335.0
  • Bit_score: 625
  • Evalue 2.90e-176

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Taxonomy

Pseudomonas sp. MRSN12121 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1008
ATGGGCTCCACGCATGGGGCTGCAGCCCCTGCTTTAAGCAGACTGAGCACGGTAATACGAGAGTATTCGCTGTTTCAGGCCGTACTGTTGGTCGTCGATCGCTTGCGTGATGCCCATCCGTACCTGAGTGAAGAGGAACTCTACGATCAGTTGGAGTTCCAGGCCAATCCGAGCCTGGGTTTCCCTGGCAGCGATGTTGATCGCGTGGAGTTTTTTGAAGAGCGCGGCCAGATGCGCGCACGTTTGCGTTTCAACCTGATCGGGTTGTTCGGCGCGGGCTCGCCCTTGCCGGCCTTCTATGGCGAGCAGGCCCTGGGCGATGGCGAGGAGGGCAACCCGACACGCAACTTCCTCGATCTGTTCCATCACCGCCTGCAACGCCTGATGCTGCCGATCTGGAGTAAATACCGCTACCGCGCCAGCTTCAAGAGTGGTGCCCTGGACCCGTTTTCAGCTCAGTTATTTGCCTTGATCGGCCTGGGTGGCGAAGAGATCCGCAAGGCCAAGGAACTGAACTGGAAACGCTTGCTGCCATACCTGGGATTGCTCAGCTTGCGCGCCCATTCGGCGGCGCTGATCGAGGCGGTGCTGCGCTACTACTTCAAGCACGCAGACCTGGTGATCGAGCAGTGCATCGAGCGCCGGGTAGAGATTCTCGACGAGCAGCGCAATTGCCTGGGGCAGGCCAACAGCCTGCTCGCTGAGGACCTGGTACTGGGTGAGCGGGTGCGCGACCGCAGCGGCAAGTTCCGCATTCATATCAGCCAGCTCGACTGGCAACGCTTCCACGAATTCCTGCCGATCGGATTCGGTTACCAGCCCTTGTGCGCGCTGGTGCGGTTCACCCTGCGCGATCCGCTGGACTACGACATTCGCCTGGTGCTGCGCCAGGAGGAAATCCGCGAACTGTGCATCGGTGAACAGAACACCTGTCGTCTGGGGTGGACCAGTTGGCTCGGTCATGAAAAGGCCGACGGCGTGGTGACCCTGGGCAGCAAAATTCATTAA
PROTEIN sequence
Length: 336
MGSTHGAAAPALSRLSTVIREYSLFQAVLLVVDRLRDAHPYLSEEELYDQLEFQANPSLGFPGSDVDRVEFFEERGQMRARLRFNLIGLFGAGSPLPAFYGEQALGDGEEGNPTRNFLDLFHHRLQRLMLPIWSKYRYRASFKSGALDPFSAQLFALIGLGGEEIRKAKELNWKRLLPYLGLLSLRAHSAALIEAVLRYYFKHADLVIEQCIERRVEILDEQRNCLGQANSLLAEDLVLGERVRDRSGKFRIHISQLDWQRFHEFLPIGFGYQPLCALVRFTLRDPLDYDIRLVLRQEEIRELCIGEQNTCRLGWTSWLGHEKADGVVTLGSKIH*