ggKbase home page

S15_scaffold_320_curated_14

Organism: S15_RifCSP_Pseudomonas_62_25_curated

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(16832..17239)

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion protein TssE2 n=3 Tax=Pseudomonas RepID=I4Y4J7_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 91.9
  • Coverage: 135.0
  • Bit_score: 240
  • Evalue 9.80e-61
type VI secretion protein similarity KEGG
DB: KEGG
  • Identity: 91.9
  • Coverage: 135.0
  • Bit_score: 240
  • Evalue 2.80e-61
Type VI secretion protein TssE2 {ECO:0000313|EMBL:EJK98552.1}; TaxID=1038921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas chlororaphis subsp. aureofaciens 30-84.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.9
  • Coverage: 135.0
  • Bit_score: 240
  • Evalue 1.40e-60

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas chlororaphis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 408
ATGAGCGGATACGGCAGCCTGTTTGAACGCCTGAGCGCAGAGGCCGACCAGCGTGTCGGTTGGAGCCGCGAGGTCGGCGCGATGGCATCGGTGGCTGCCCATCTGGGCAAGATGCTCAGCACCCGTGCGGGGAGCGTGCAAACGCTTTCCGACTACGGGTTGCCCGATCTCAACGACATGCGCTTGAGCTTGCACGATGCCCTGAGCCAGGCCCGCTTGGCCATCGAGCACTTCATCGAAGCCTACGAGCCGCGGCTCAGTCAGGTGCGTGTCGTTTCTCTGCCGCGTGATCATGACCCGCTCAAGCTGGCGTTCAGCATTGAAGGCTTGCTTGAGGTGGAAGGGATCAAGCGTCAGGTCAGTTTTTCCGCCTGCCTGGATGGCAGCGGGCAAGTCAAGGTCAGTTAA
PROTEIN sequence
Length: 136
MSGYGSLFERLSAEADQRVGWSREVGAMASVAAHLGKMLSTRAGSVQTLSDYGLPDLNDMRLSLHDALSQARLAIEHFIEAYEPRLSQVRVVSLPRDHDPLKLAFSIEGLLEVEGIKRQVSFSACLDGSGQVKVS*