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S15_scaffold_320_curated_15

Organism: S15_RifCSP_Pseudomonas_62_25_curated

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(17254..18729)

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion protein, EvpB/VC_A0108 family n=1 Tax=Pseudomonas sp. GM17 RepID=J2VCD8_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 96.5
  • Coverage: 491.0
  • Bit_score: 960
  • Evalue 4.00e-277
  • rbh
Type VI secretion protein, EvpB/VC_A0108 family {ECO:0000313|EMBL:EJM01158.1}; TaxID=1144323 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM17.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.5
  • Coverage: 491.0
  • Bit_score: 960
  • Evalue 5.60e-277
type VI secretion protein similarity KEGG
DB: KEGG
  • Identity: 96.3
  • Coverage: 491.0
  • Bit_score: 959
  • Evalue 2.50e-277

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Taxonomy

Pseudomonas sp. GM17 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1476
ATGACTACCCGTGCCGCGCAACACCAAAGCAACGAGAGCAGCGAGTACAGCATTCTCGACGGCATCATCGCCGAAACCCGTCTGACTCCGAACGACGAAGCCTACGATATCGCCAAGCGCGGAGTGTCAGCCTTCATCGAGGAGCTGCTCAAGCCGCAGAACAGCGGCGAGCCGGTCAAGAAGGCCATGGTCGATCGCATGATCGCCGAGATCGATGCCAAGCTCAGCCAGCAGATGGATGAGATTCTCCACCACGAAGACTTTCAGTCGCTGGAGTCCGCCTGGCGGGGGCTGCAGTTACTGGTGGAACGCACCAATTTCCGTGAAAACATCAAGATAGAAATCCTCAACGTCTCCAAGCAGGACCTGCTGGACGACTTCGAAGATTCGCCGGAAGTGATGCAGGCCGGCCTTTACAAACACATCTACACCGCGGAGTACGGCCAGTTTGGTGGCCAGCCAGTCGGCGCTATCATCGCCAACTACTTCATGTCGCCCAGTTCTCCTGACGTGAAGTTGATGCAGTACGTCTCCAGCGTTGCCTGCATGTCACATGCGCCGTTCATTGCCGCCGCAGGCCCGAACTTCTTTGGCCTGGAAAGCTTCACCGGCCTGCCGGACCTGAAGGATCTGAAGGATCATTTCGAAGGCCCGCAATTTGCCAAGTGGCAGAGCTTCCGGCAATCGGAAGACTCTCGCTACATTGCCCTGACCTTGCCGCGGTTCCTGCTGCGCAATCCCTATGATCCGGAAGAAAACCCGGTCAAGTCCTTCGTCTACAAGGAAACCGTTGCCAACAACCACGAGCACTACCTGTGGGGCAATACCGCATATGCGTTCGGCACCAAGTTGACCGACAGCTTCGCCAAGTTCCGCTGGTGCCCGAACATCATCGGTCCGCAGAGCGGTGGCGCGGTGGAAGACTTGCCGCTGCACCATTTCGAAAGCATGGGTGAAATCGAAACCAAGATCCCGACTGAAGTGCTGGTTTCAGATCGTCGTGAGTATGAACTGGCCGAGGAGGGCTTCATCTCCTTGACCATGCGCAAGGGCAGTGACAACGCCGCGTTCTTCTCTGCCAACTCGGTACAGAAGCCGAAGTTCTTTGGCATCAGCGCTGAAGGCAAGACGGCGGAGCTCAACTACAAGCTTGGCACCCAACTGCCCTACATGATGATCGTCAACCGTCTGGCTCACTACCTGAAGGTGCTGCAGCGTGAACAGCTCGGCTCATGGAAGGAGCGTACCGATCTTGAGCTGGAGCTCAATAAATGGATCCGTCAGTACGTGGCTGACCAGGAAAACCCCAGTGCCGAAGTCCGTGGCCGTCGTCCGCTGCGCGCCGCGCAGATCATCGTCAGCGATGTGGAAGGCGAGCCGGGCTGGTATCGCGTCAGTCTGAACGTGCGCCCGCACTTCAAGTACATGGGGGCCGACTTCACGCTTTCTCTGGTTGGCAAACTGGATAAAGAGTAA
PROTEIN sequence
Length: 492
MTTRAAQHQSNESSEYSILDGIIAETRLTPNDEAYDIAKRGVSAFIEELLKPQNSGEPVKKAMVDRMIAEIDAKLSQQMDEILHHEDFQSLESAWRGLQLLVERTNFRENIKIEILNVSKQDLLDDFEDSPEVMQAGLYKHIYTAEYGQFGGQPVGAIIANYFMSPSSPDVKLMQYVSSVACMSHAPFIAAAGPNFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRQSEDSRYIALTLPRFLLRNPYDPEENPVKSFVYKETVANNHEHYLWGNTAYAFGTKLTDSFAKFRWCPNIIGPQSGGAVEDLPLHHFESMGEIETKIPTEVLVSDRREYELAEEGFISLTMRKGSDNAAFFSANSVQKPKFFGISAEGKTAELNYKLGTQLPYMMIVNRLAHYLKVLQREQLGSWKERTDLELELNKWIRQYVADQENPSAEVRGRRPLRAAQIIVSDVEGEPGWYRVSLNVRPHFKYMGADFTLSLVGKLDKE*