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S15_scaffold_320_curated_17

Organism: S15_RifCSP_Pseudomonas_62_25_curated

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(19292..20848)

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion protein TssA2 n=1 Tax=Pseudomonas chlororaphis O6 RepID=I4Y410_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 86.1
  • Coverage: 518.0
  • Bit_score: 911
  • Evalue 2.90e-262
  • rbh
type VI secretion protein ImpA similarity KEGG
DB: KEGG
  • Identity: 86.3
  • Coverage: 518.0
  • Bit_score: 912
  • Evalue 3.70e-263
Type VI secretion protein ImpA {ECO:0000313|EMBL:AIC23014.1}; TaxID=587753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas chlororaphis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.1
  • Coverage: 518.0
  • Bit_score: 911
  • Evalue 4.10e-262

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Taxonomy

Pseudomonas chlororaphis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1557
ATGAACTACTCAAATAAACTGTCTGCTCATTATCTTGAGATCGCCAAAGTCTCTATTTCCAAAGAGAGTTTTGCGGGCGCGGATGTTCGCTTTTCGAGTGAATACGAAGCCCTTGAAAACGAGTTGGCCAAAGCCCAGTCCATGCATGAAAGCGGTCAGATCGACTGGCTGAAAGTTCTTGAAAACAGTGAAAACCTGCTACGTGTGCAGTCCAAGGATCTGCGGGTGGCCGCCTGGCTCACTTGGGCGCTGTATCAGCGCGAGTCCTTCGCAGGATTGCTGGCGGGTTCCAGCCTCTTGCAGTACCTGTGTGAACAGCATTGGGTCGAGGTCCACCCCAATAAACTGCGTACCCGTGGTGCCGCCATCAGTTGGCTGGTGCCTCGACTGGAGCAGGCGTTAAGCGAAAACATCGCGATCAAGGAACAGTTACCGCTGTTTCGTCGATTGGTGCTGAATCTGGAAAAGCTTGATGCAGTACTGACCCAGCATCTTGGCGATGACGCTCCTTTGTTGCTGCCCATCTGTCGGCGGCTGTCGAGCATGATCCAGCGTGCCGTCGAGCATCAGCCAGAGCCCGGCGCCGTCGGCACGGTGGTAGCACAGGTCAAGCAGGCAGCGACCCAGCTCTTCTCATCGGCGTCGTCGATCGATAACGAAAAGGATGCTCAGAGGGTCCTGCGTGCGCTGCAGGAGCATGCCCGACCTCTGTGCGCCTGGTGGCTCAAGCAGAAGGCTACCGACGTGCGCTCCCTGCGCCTGAACCGCACCATGCTGTGGTTGCCCATCGATAGTGTCCCGGAGCGTAACGCTGAACAGGTCACGGCATTGCGAGGGCTGCCAGGGGACAAACTCAAGGCTTACCAGGAACGCTTTGCCGGTGGTCAGTTCGCTGATTTGTTGCTGGAGCTCGAAGCCAGCCTGTCCAGGGCACCCTTTTGGTTCGACGGGCAGCGCATGGTCTGGGAGTGCTTGCAAGCGTTGAACGCCGATCAGGCCATGCGTGAAGTCGAATTTCACTTTGCGCTCTTGCTGCAGCGTCTACCGGGAGTGGTGGAGTTGCGCTTTCACGACGGCACTCCCTTCGCCGATCCGGCCACTCGAAGCTGGATCAGCGCCCATGTCATGCCTCACCTATCCGCCACCAGCGCACCGCGTCAGGTCGACGCCAGCACCATCCAGCCGATTTGGGAGGAGGCCCTGGAAGAGGTCTTGCCGATCCTGCGCAAGGATGGCCTCAAGGCGGCGGTGCAAGTACTCAAGCCAGGCCTGCAGAGTGCGCGTGGCGGTCGCGTGAGGTTCTTCTGGCATTTCAGCCTGGCGCGGCTGTGTTTCATCGCCAAGAAGTACGAGCTGGCCAAGACCCAGCTGGAAACCCTTGATCAAGAATTGCAGAACTCAGGCTTGCACGCCTGGGAGCCGGATCTTGCGTTGGAAGTGCTGCACCTCCTGCATAGCTGCTGTGAGTTGTTGCCGCAGAACCACGCAGTGCGAGAACGCAAGGAAGAGATTTATCGCAGGCTGTGCCATCTCGACCTCGAGGTGGTACTCGAATAG
PROTEIN sequence
Length: 519
MNYSNKLSAHYLEIAKVSISKESFAGADVRFSSEYEALENELAKAQSMHESGQIDWLKVLENSENLLRVQSKDLRVAAWLTWALYQRESFAGLLAGSSLLQYLCEQHWVEVHPNKLRTRGAAISWLVPRLEQALSENIAIKEQLPLFRRLVLNLEKLDAVLTQHLGDDAPLLLPICRRLSSMIQRAVEHQPEPGAVGTVVAQVKQAATQLFSSASSIDNEKDAQRVLRALQEHARPLCAWWLKQKATDVRSLRLNRTMLWLPIDSVPERNAEQVTALRGLPGDKLKAYQERFAGGQFADLLLELEASLSRAPFWFDGQRMVWECLQALNADQAMREVEFHFALLLQRLPGVVELRFHDGTPFADPATRSWISAHVMPHLSATSAPRQVDASTIQPIWEEALEEVLPILRKDGLKAAVQVLKPGLQSARGGRVRFFWHFSLARLCFIAKKYELAKTQLETLDQELQNSGLHAWEPDLALEVLHLLHSCCELLPQNHAVRERKEEIYRRLCHLDLEVVLE*