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S15_scaffold_585_curated_7

Organism: S15_RifCSP_Pseudomonas_62_25_curated

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 8191..8493

Top 3 Functional Annotations

Value Algorithm Source
soxD; sarcosine oxidase subunit delta (EC:1.5.3.1) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 100.0
  • Bit_score: 222
  • Evalue 3.40e-56
Sarcosine oxidase, delta subunit {ECO:0000313|EMBL:AAY94917.1}; EC=1.5.3.1 {ECO:0000313|EMBL:AAY94917.1};; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 100.0
  • Bit_score: 222
  • Evalue 1.70e-55
Sarcosine oxidase, delta subunit n=2 Tax=Pseudomonas protegens RepID=Q4K4P8_PSEF5 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 100.0
  • Bit_score: 222
  • Evalue 1.20e-55

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Taxonomy

Pseudomonas protegens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 303
ATGTTGCATATCTTCTGTCCTCACTGCGGCGAGCTGCGCTCCGAAGAGGAATTCCATTCGTCCGGCCAGGCGCACATTCCCCGGCCGCTGGACCCCAACGCCTGCACCGACGAGGAGTGGGGCGACTACATGTTCTTCCGCGATAACCCTCGCGGCCTGCACCACGAGCTGTGGATTCACGCCGCCGGTTGCCGCCAGTACTTCAACGCCACCCGCGACACCGTGACCTACGAAATTCTTGAAACCTACAAGATAGGCACCAAACCGCAGTTCACCGCCAAGGCTGCTGGAGAGAAGGTATGA
PROTEIN sequence
Length: 101
MLHIFCPHCGELRSEEEFHSSGQAHIPRPLDPNACTDEEWGDYMFFRDNPRGLHHELWIHAAGCRQYFNATRDTVTYEILETYKIGTKPQFTAKAAGEKV*