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S15_scaffold_585_curated_14

Organism: S15_RifCSP_Pseudomonas_62_25_curated

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(16078..16752)

Top 3 Functional Annotations

Value Algorithm Source
Putative membrane protein n=1 Tax=Pseudomonas protegens CHA0 RepID=R4RSL6_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 92.9
  • Coverage: 224.0
  • Bit_score: 414
  • Evalue 4.80e-113
  • rbh
anti-sigma-K factor RskA family protein similarity KEGG
DB: KEGG
  • Identity: 95.5
  • Coverage: 224.0
  • Bit_score: 425
  • Evalue 5.90e-117
Anti-sigma-K factor RskA family protein {ECO:0000313|EMBL:BAQ83535.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.4
  • Coverage: 224.0
  • Bit_score: 425
  • Evalue 3.80e-116

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Taxonomy

Pseudomonas sp. St29 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 675
ATGAACTATCAAACCCCAGAACGCCGCCGCGCCCTGGCCGCCGACTACGCCATCGGCCTGATGCAGGGCGCCGCCCGCCGGCGCTTCGAAATGCTCCTGCTGGACGACCCGGCGCTGCGCGAAGAACTGGCGCAGTGGCAGGAAAGCCTCGCCAGCCTGACCGAAACCCTGCCTGAAGCCGCGGTGCCGGAACGGGTCTGGGCGGGCATCCAGGCACGCATCGAACCGCAAGTGCTGCACGTACCGCAGAAGAATCCGCTGTGGATGCGCCTGCGTCTGGCGCTCGCCGCCTGCGCCGTGCTGGCGACCCTGTACATCGGCTTTATCCAGCAGAGCGATCAGGTGCGCTACAGCGCCACCCTGCTCAGCGCCGACCAGCAACCGGCCCTGCGGATCAAGGCCCATGCCCAGTACCTGCAAGTGGAACCCCTGACCCTGGCGGCTGTTGGCCTGGACCGCAGCCTGGAACTCTGGGCGATCCCTGCCGACGGCAAACCGATTTCCCTCGGCGTGGTGCCGGTAGGCGGCCAAGGCAAGATCAACCTGAGCCCGGCCCAACGCGAACTGCTGGGCACCCCGATCGCCCTGGCCGTGAGCCTGGAACCCCACGGCGGCTCACCTACTGGGCAACCCACCGGGCCGGTGTTGTACCAGGGGCAATTGGCGGCGCTGTAA
PROTEIN sequence
Length: 225
MNYQTPERRRALAADYAIGLMQGAARRRFEMLLLDDPALREELAQWQESLASLTETLPEAAVPERVWAGIQARIEPQVLHVPQKNPLWMRLRLALAACAVLATLYIGFIQQSDQVRYSATLLSADQQPALRIKAHAQYLQVEPLTLAAVGLDRSLELWAIPADGKPISLGVVPVGGQGKINLSPAQRELLGTPIALAVSLEPHGGSPTGQPTGPVLYQGQLAAL*