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S15_scaffold_41_curated_3

Organism: S15_RifCSP_Pseudomonas_62_25_curated

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 5343..5972

Top 3 Functional Annotations

Value Algorithm Source
LuxR family transcriptional regulator n=1 Tax=Pseudomonas sp. CMAA1215 RepID=U6ZZ09_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 87.5
  • Coverage: 208.0
  • Bit_score: 348
  • Evalue 4.00e-93
Two-component response regulator {ECO:0000313|EMBL:BAQ80342.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.6
  • Coverage: 208.0
  • Bit_score: 391
  • Evalue 7.50e-106
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 76.9
  • Coverage: 208.0
  • Bit_score: 314
  • Evalue 1.40e-83

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Taxonomy

Pseudomonas sp. St29 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 630
ATGCACAGCGTATTAATAGTGGATGATCATCCCGTCGTCCGACTGGCGGTGAAGGTTCTGCTGGAAAAGCACGATATGCAGGTGGTGGGCGAAACCGATAACGGGCTGGATGCGCTAGAGCTGATACGCGAGCATGTTCCGAGTGTGGTGATTCTCGATATCGGCATTCCCAAACTCGATGGCCTCAAGGTGCTGTCCCGGATCAAGGCACTAGGCTTGCCCACCGAGGTACTGGTGCTGACATCACAGTCCGTCGAGAGCTTTTGCAAACGCTGCATCCAGCTTGGCGCTAGAGGCTTCGTCAACAAGGAAGAAGACCTGAGCAATCTGGTGGTGGCGCTGAATGCGGTGCTGGCCGGCTATACCTTTTATCCTTCCCAGGTCACCGATGTGTCCAAGCCGGCTGCCGAGCAGTTGTCCGAGACCGAGCTGATCGGCTCACTGACCGATCGGGAAATGATCGTGCTGCAGTATCTGGCTCAGGGTTATTCCAACAAGGCCATCAGCGAAAAGCTGTTTCTCAGCAACAAGACCGTCAGCACCTACAAGGCCCGTTTGTTACAGAAACTCGGGCTGGGCTCGCAAGTTGGCCTGGCAGAGTTCGCCAAGCGCCATGGGCTGATTATCTGA
PROTEIN sequence
Length: 210
MHSVLIVDDHPVVRLAVKVLLEKHDMQVVGETDNGLDALELIREHVPSVVILDIGIPKLDGLKVLSRIKALGLPTEVLVLTSQSVESFCKRCIQLGARGFVNKEEDLSNLVVALNAVLAGYTFYPSQVTDVSKPAAEQLSETELIGSLTDREMIVLQYLAQGYSNKAISEKLFLSNKTVSTYKARLLQKLGLGSQVGLAEFAKRHGLII*