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S15_scaffold_41_curated_8

Organism: S15_RifCSP_Pseudomonas_62_25_curated

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 9715..12171

Top 3 Functional Annotations

Value Algorithm Source
Fimbrial outer membrane usher protein n=1 Tax=Serratia marcescens subsp. marcescens Db11 RepID=V5ZW53_SERMA similarity UNIREF
DB: UNIREF100
  • Identity: 59.8
  • Coverage: 819.0
  • Bit_score: 1034
  • Evalue 0.0
  • rbh
Fimbrial biogenesis outer membrane usher protein {ECO:0000313|EMBL:BAQ80347.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.9
  • Coverage: 817.0
  • Bit_score: 1562
  • Evalue 0.0
fimbrial biogenesis outer membrane usher protein MrfC similarity KEGG
DB: KEGG
  • Identity: 69.9
  • Coverage: 810.0
  • Bit_score: 1189
  • Evalue 0.0

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Taxonomy

Pseudomonas sp. St29 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2457
ATGGCCAGCTTGGCTAGTGCAGCCGAAGAGTTTCAGTTCAATACGGACATCCTTGATCTCAAGGATCAACAAAATCTCGATCTCGGCTTGTTTTCCAAGGCTAACTTCATTTTGCCGGGGCAATACAACCTGGTCGTTCACGTGAACCGCGACTCGTTGCCGGAAACTTCCGTGGACTACATCGTCCCGGAGGATGACCCCAAGGGCAGTGTGGCCTGCATCTCTCCGGCACTGGTGGCCGAGTTGGGTCTGAAAAAACAGCGGATGAATCAACTTGCCTGGTGGCACCAGGGCAATTGTTTGGATATCAGCAGCATTCCAGGCATGACGGTGCGTGGCGACCTGGGCGCCTCGGCCTTGTATCTGAACATTCCCCAGGACGCCCTTGAATACACGGCAAGCAACTGGGACCCGCCTTCGCGCTGGGACGAGGGCATTAGCGGATTTTTGTTTGACTACAACTTCAATGCCCAGACCATGGATTACGCCGGACCTCAGGCCAGCGACCAGCAGTTGACGGGTAATGGCACCGCCGGTTTCAACCTCGGCGCCTGGCGCCTGCGGGCCGATTGGCAAGGGCAGGTGCACAAGACCTCCGGCAAGCCTAGCCAGCGGCAATTCGCCTGGAGCCGCTACTACGCATCGCGGGCGATTCCGGCGTTGCGCGCCCACCTCAGCCTGGGAGAAAACTATCTGGACTCCAACCTGTTTGGCAGCGTGCGCTACACCGGTGCCAGTCTGGCCACCAGCGACAACATGCTGCCGCCCAACCTGCGCGGCTATGCGCCGGAAGTCAGCGGTGTCGCGCGGACCAACGCGCGCGTGCTGGTCACGCAGCAGGGGCGCATTCTGTACGACACCCAAGTGCCGGCGGGGCCCTTTCGCATCCAGGACCTGAGCGATGCGGTGAGCGGCAAGCTGGATGTGCGTGTCGAAGAGCAGGACGGCAGCGTTCAGGAGTTCCAGCTGGACACGGCCAGCATTCCCTACCTCAGCCGCCCGGGCACGGTGCGCTACAAAGTGTCCGCCGGCCGACCTTCGGACTGGGAGCACGAACCCGATGGCCCAGAGTTCGCCAGCGGCGAATTCTCTTGGGGGGTGAGCAATGGCTGGTCGCTGTATGGCGGGGCGCTGGGGGCGCAAGACTATCGCTCGCTGGCCGTGGGCGTGGGTCGTGACCTGATGGCCTTCGGCGCCCTGGCGGTTGACGTGACTCAGTCCAATGCCCGTCTGGCGGAAATCGGCCAGCGCCAGGGCAAATCCTATCGCGCCAGCTATTCGAAGCGCTTCGAGGATTACGACAGCCAGGTGACGTTCGCCGGTTATCGTTTCTCCGAGGAAGATTTCATGACCATGAACGACTTTATCGAGGCTCGTCGCAGTGGCCGGCTGAATAATCAGAGCAAGGAAATGTACACCGCGACACTGAGCAAGAATTTTCGTGATCAGAACCTGAGCCTGTACTTCAACTACAACCACCAGACCTATTGGAACAATGCGCCGAGCGACCGTTACAGCCTGTCGCTGTCGCGATATTTCAACCTGGGCGGGCTGAAGAACCTGGGCCTGTCGCTGACCGCCTACCGCAGTCAGAGCCATGGCGCGGTCGATGAAGGCGCCTATCTCTCCCTGAGTCTTCCCTGGGGCGACAGCGGCTCGGTCAGTTACAACTCCACGCTCAACCGTGGCAGCAGCGGTCACAGCTTGAGTTATTACGACCGTCCGGATGAGCGCAACAGCTACATGCTCAGCGCCGGTACCGCCAGCGATGGCAACACGGCCAGCGGCTACCTGAACCACGAGGGCAGCCTGGCCGATGTGACCGCCAGCGCCAGCTATCAGGCCGGACGCTATCGTTCTGCCGGTCTTGCAGTGCAGGGCGGGGCGACCCTGACCGCCGAAGGGGCGGCGCTGCACCGGATCACCACCCTGGGCGGTACTCGCCTGCTGCTCGATACCAATGGCGTGGCCGGGGTGCCGGTGCAGGGCAACGGCGCCAGCACCTATTCCAACCGATTCGGCAAGGCGGTGGTGGCTGATATGAACAGCTATTACCGCAATCAGGCGAGCATCAACCTGGATCAACTGGCTGACGACCTGGAAGCCGGGCGCTCGGTGACCCAGGCCACGCTGACCGAGGGCGCGATTGGCTACCGGCGCTTCGGCATTGTTTCCGGGAGCAAGGGCATGGTCCGCATCCTCCTGCCGGACGCGAGCCCGCCGCCTTTTGGCAGCGGTGTGTACAACGCACGAGGCCAGGAAACCGGAATCATTGGCGAAGACGGCCTGGTGTACCTCACCGGCATGCAGGTCGGTGACCTGATGTCGGTGCAGTGGGACGGCAAGGCCCAATGCGACTTCGCCCTGACGGAGCAGGTCAATGCGGATGACCCGCAAGCGCAATTTGTCTGCCGGCCCCTTGCGGCCCGCGAAATCCAATCCCCTAGCAACCCGTAA
PROTEIN sequence
Length: 819
MASLASAAEEFQFNTDILDLKDQQNLDLGLFSKANFILPGQYNLVVHVNRDSLPETSVDYIVPEDDPKGSVACISPALVAELGLKKQRMNQLAWWHQGNCLDISSIPGMTVRGDLGASALYLNIPQDALEYTASNWDPPSRWDEGISGFLFDYNFNAQTMDYAGPQASDQQLTGNGTAGFNLGAWRLRADWQGQVHKTSGKPSQRQFAWSRYYASRAIPALRAHLSLGENYLDSNLFGSVRYTGASLATSDNMLPPNLRGYAPEVSGVARTNARVLVTQQGRILYDTQVPAGPFRIQDLSDAVSGKLDVRVEEQDGSVQEFQLDTASIPYLSRPGTVRYKVSAGRPSDWEHEPDGPEFASGEFSWGVSNGWSLYGGALGAQDYRSLAVGVGRDLMAFGALAVDVTQSNARLAEIGQRQGKSYRASYSKRFEDYDSQVTFAGYRFSEEDFMTMNDFIEARRSGRLNNQSKEMYTATLSKNFRDQNLSLYFNYNHQTYWNNAPSDRYSLSLSRYFNLGGLKNLGLSLTAYRSQSHGAVDEGAYLSLSLPWGDSGSVSYNSTLNRGSSGHSLSYYDRPDERNSYMLSAGTASDGNTASGYLNHEGSLADVTASASYQAGRYRSAGLAVQGGATLTAEGAALHRITTLGGTRLLLDTNGVAGVPVQGNGASTYSNRFGKAVVADMNSYYRNQASINLDQLADDLEAGRSVTQATLTEGAIGYRRFGIVSGSKGMVRILLPDASPPPFGSGVYNARGQETGIIGEDGLVYLTGMQVGDLMSVQWDGKAQCDFALTEQVNADDPQAQFVCRPLAAREIQSPSNP*