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S15_scaffold_239_curated_7

Organism: S15_RifCSP_Pseudomonas_62_25_curated

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(8456..9070)

Top 3 Functional Annotations

Value Algorithm Source
Translocator protein, LysE family n=2 Tax=Pseudomonas protegens RepID=Q4KEC9_PSEF5 similarity UNIREF
DB: UNIREF100
  • Identity: 97.1
  • Coverage: 204.0
  • Bit_score: 385
  • Evalue 2.90e-104
  • rbh
LysE family translocator protein {ECO:0000313|EMBL:BAQ80274.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.5
  • Coverage: 204.0
  • Bit_score: 387
  • Evalue 6.20e-105
LysE family translocator protein similarity KEGG
DB: KEGG
  • Identity: 97.1
  • Coverage: 204.0
  • Bit_score: 385
  • Evalue 8.10e-105

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Taxonomy

Pseudomonas sp. St29 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 615
ATGTTGACCCTGGATTTTCTGCTTACCAGCCTGATTGTCGTGCTGATTCCCGGCAGCGGCGTGATCCTGACCATTTCCACCGCCCTGGTGGCCGGCAAGCGCGCCAGCCTGTTCACCGCCATCGGCTGCACCGCCGGGATCGTCCCCCACCTGCTGGCCTCGATCCTCGGTCTGTCGGCGATCCTGCACACCAGCGCCCTGGCCTTCCAGGGCCTGAAGTTCGCCGGGGTCGCCTACCTGTTGTACCTAGCCTATGCCACCTGGCGTGATCGCTCGGCCTTTGCGGTGGACAGCAACACGGTGAGCCACGGCGCCGGCGCGCTGATGCTCAAGGCCTGCCTGCTGAACATCCTCAACCCCAAGCTGACCATTTTCTTCCTGGCCTTCCTGCCCCAGTTCATCGCCCATGACGGCAGCGATCCGATCCCGCAGATGCTGCTCTTGAGCGGCGTGTTCATGGCCATGACCTTCTTCGTGTTCGTGCTCTACGGGCTGCTGGCCAATCTGTTCCGTACCGCGGTGATCGAGTCGCCCAAAGTCCAGAACTGGTTGCGCCGCAGCTTTGCCGCAAGCTTCGCGGGACTGGGCCTGAACCTGGCCTTCGCCCAGCGTTGA
PROTEIN sequence
Length: 205
MLTLDFLLTSLIVVLIPGSGVILTISTALVAGKRASLFTAIGCTAGIVPHLLASILGLSAILHTSALAFQGLKFAGVAYLLYLAYATWRDRSAFAVDSNTVSHGAGALMLKACLLNILNPKLTIFFLAFLPQFIAHDGSDPIPQMLLLSGVFMAMTFFVFVLYGLLANLFRTAVIESPKVQNWLRRSFAASFAGLGLNLAFAQR*