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S15_scaffold_239_curated_11

Organism: S15_RifCSP_Pseudomonas_62_25_curated

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(12113..13705)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulatory protein RtcR n=1 Tax=Pseudomonas protegens CHA0 RepID=R4RIG0_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 97.5
  • Coverage: 530.0
  • Bit_score: 1036
  • Evalue 0.0
  • rbh
rtcR; transcriptional regulatory protein RtcR similarity KEGG
DB: KEGG
  • Identity: 97.5
  • Coverage: 530.0
  • Bit_score: 1036
  • Evalue 0.0
  • rbh
Fis family transcriptional regulator {ECO:0000313|EMBL:BAQ73983.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.9
  • Coverage: 530.0
  • Bit_score: 1036
  • Evalue 0.0

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Taxonomy

Pseudomonas sp. Os17 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1593
ATGTCGAACAAGCCCACGGTCGCCATCGGTTTTGTCGGTTCCACCCTCGATCGCGTCGGCAAGGGCGCCAATCGCTGGAGCCATTGGCGCCCCACGGTCGGTCTGTGCCAGCAGCAGGACGTGCTGATCCAGCGCCTGGAACTGATCCACGGCCTGGAAGCCCGGGATATCAGCCTGGCCGAACGGGTGGCCAACGATGTGCGCCAGGTGTCGCCGGAAACCGAAGTGCGCCTGCACCCCATGGGCCTGAACAATCCCTGGGATTTTGAAGAGGTGTACGGCGCCCTCCACGACTTCACCAGCGCCTACCCGTTCGATACCGAGCGCGAGGATTACCTGGTGCACATCACCACCGGTACCCACGTGGCGCAGATCTGCTGGTTCCTGCTGACCGAGGCGCGCTACCTTCCGGCCCGGCTGATCCAGACCTCGCCTGCCCGGCGCCGCGACCCCAGCGAACACGCCACCGGCACCCATGCCCTGATCGACCTCGACCTGTCGCGCTACGACCGCATCGCCTCGCGCTTTGCCCACAAGCGCCTGGAAGGCCTGGCCTTCCTCAAGTCCGGGATCGCTACCCGCAACCCGGCGTTCAACCGCTCCATCGAGCAGATCGAGCGGGTCGCGGTGCGTTCCAAGGCGCCAATGCTGCTGATCGGCCCCACCGGTGCCGGCAAGTCGTTCCTGGCCCGGCGCATCTATGAACTCAAGCGCGGCCGGCACCAGGTGCAGGGACGCTTTGTCGAGGTCAACTGCGCCACCCTGCGCGGTGACGGCGCCATGTCGGCGCTGTTCGGGCATATCAAGGGCGCCTTCACCGGTGCCCAGAACGCCCGGGAGGGCCTGCTGCGGGCGGCCCACGGCGGCATGCTGTTTCTTGACGAGATCGGCGAACTGGGACTGGACGAACAGGCCATGCTGCTCAAGGCCATCGAGGAAAAGCGCTTCTTCCCCATGGGCGCGGACCAGGAAGTGGAGAGTGACTTCCTGATCATCGCCGGCACCCACCGCGACCTGCGCGGCCGGGTGGCCCAGGGCCTGTTCCGCGAAGACCTGTATGCGCGGATCAACCTCTGGACCTTCAACCTGCCGGGACTGGCGGGACGCCGTGAGGACATCGAGCCGAACATCGATTTCGAGCTGGAACGCCACGCCCGGGAGCAAGGGCAACTGGTGCGTTTCAACCTGGAAGCACGGCGCCGCTACCTGGCCTTTGCCAGCTCCAGCGAAGCGGCGTGGCTGGGCAACTTCCGCGAGCTGTCGGCGTCCATCACCCGCATGGCCACCCTGGCCGACAGCGGACGCATCGACCAGGCCCAGGTCGAAGAGGAAATCCAGCGCCTGCGCCACGCCTGGGGCCTGGAAAATGCCGAGGATGAACTGCAGCAACTGTTGGGCGACGAGGTAGAGCTGGACCTGTTCGACCGCCTGCAACTCAAGGCGGTGATTGCCGAATGCCGTCGCGCCGACAGCCTGTCGGACGCCGGGCGCCGGCTGTTCGGCGTGTCACGCCTGGGCAAGGCCAACCCCAACGACGCCGACCGCCTGCGCAAATACCTGGCGCGCTTCGGCCTGGACTGGAAGCAACTGTAG
PROTEIN sequence
Length: 531
MSNKPTVAIGFVGSTLDRVGKGANRWSHWRPTVGLCQQQDVLIQRLELIHGLEARDISLAERVANDVRQVSPETEVRLHPMGLNNPWDFEEVYGALHDFTSAYPFDTEREDYLVHITTGTHVAQICWFLLTEARYLPARLIQTSPARRRDPSEHATGTHALIDLDLSRYDRIASRFAHKRLEGLAFLKSGIATRNPAFNRSIEQIERVAVRSKAPMLLIGPTGAGKSFLARRIYELKRGRHQVQGRFVEVNCATLRGDGAMSALFGHIKGAFTGAQNAREGLLRAAHGGMLFLDEIGELGLDEQAMLLKAIEEKRFFPMGADQEVESDFLIIAGTHRDLRGRVAQGLFREDLYARINLWTFNLPGLAGRREDIEPNIDFELERHAREQGQLVRFNLEARRRYLAFASSSEAAWLGNFRELSASITRMATLADSGRIDQAQVEEEIQRLRHAWGLENAEDELQQLLGDEVELDLFDRLQLKAVIAECRRADSLSDAGRRLFGVSRLGKANPNDADRLRKYLARFGLDWKQL*