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S15_scaffold_239_curated_17

Organism: S15_RifCSP_Pseudomonas_62_25_curated

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 20267..21295

Top 3 Functional Annotations

Value Algorithm Source
RNA 3'-terminal phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200}; Short=RNA cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; Short=RNA-3'-phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; EC=6.5.1.4 {ECO:0000256|HAMAP-Rule:MF_00200};; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.9
  • Coverage: 343.0
  • Bit_score: 633
  • Evalue 1.40e-178
rtcA; RNA 3'-terminal phosphate cyclase RtcA (EC:6.5.1.4) similarity KEGG
DB: KEGG
  • Identity: 91.2
  • Coverage: 342.0
  • Bit_score: 621
  • Evalue 1.10e-175
  • rbh
RNA 3'-terminal phosphate cyclase n=1 Tax=Pseudomonas protegens CHA0 RepID=R4RHZ0_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 91.2
  • Coverage: 342.0
  • Bit_score: 621
  • Evalue 4.00e-175
  • rbh

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Taxonomy

Pseudomonas sp. St29 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1029
ATGAAACAGGATGTCATCGAACTGGACGGCGCCATCGGCGGCGGCCAGGTACTGCGCAGCGCCTTGAGCTTGTCGATGCTCAGCGGCAAGACCCTGCGTATCCATAATATTCGTGCCCGGCGCAGCCGCCCGGGGCTGCTGCGTCAGCACCTGACGGCGGTGCAGGCCGCGGCCCAGGTCTGTGGCGCCAAGACCTCGGGGGTCGAACTCGGCTCTCAGGCCCTGACCTTCGAACCGGGGCCGATCCGTGGCGGTGACTACCGCTTCGCCATCGGTACGGCGGGCAGTTGCACCCTGGTGCTGCAGACCCTGCTGCCAGCCTTGTTGCATGCGCCGCAACCCAGCCGCGTGAGCATCAGCGGCGGCACCCACAATCCCCTGGCGCCACCGGTGGATTTCCTCCAGCAGGCCTGGTTGCCGTTACTGCGGCGCATGGGCGGGCGGGTGGAACTGCAACTGTTGCGCCATGGTTTCGTCCCGGCCGGCGGTGGCGAGCTGGAGGCCTTTGTCCAACCGTCGGTGCTGCAGCCCCTGCACCTGCAAGAGCGTGGCGCACTGCTGGGCAGCCGGGCCTGGGCGCTGAGCGCGGGCCTGCCCGAGCATGTGGCGGAGCGCGAGTTGCGTCGGGTGCACAATCGCTTGGAACTGCCGCGCGAGCACCTCACCCCGGTGCAGCTGGATGAACAATACGGCCCGGGCAATGTGCTGTTGCTGGAGTTCGCCTTCGAGCACCTGACTGAGCTGTTCAGCGGATTCGGCCAGAACAGCCTGCGGGCGGAAAAGGTCGCCGACGTTGCCATCGATCAGGCCCGCGCCTGGCTGGACTCCGGCGCGGCGGTGGCCGAGCACCTGGCCGATCAACTGCTGCTGCCCATGGCCCTGGCCGGCGGCGGCAGCTTCACCACGCCGTGCATGACCGAGCACCTGGAAAGCAATATCCGGGTGATCGAAGCGTTCCTGCCGGTGCGTATCGAGGCGCGTTCGCTGGGCGCGCACCTGTTGCGGATGGAGTGCCACGGCCTGGGATGA
PROTEIN sequence
Length: 343
MKQDVIELDGAIGGGQVLRSALSLSMLSGKTLRIHNIRARRSRPGLLRQHLTAVQAAAQVCGAKTSGVELGSQALTFEPGPIRGGDYRFAIGTAGSCTLVLQTLLPALLHAPQPSRVSISGGTHNPLAPPVDFLQQAWLPLLRRMGGRVELQLLRHGFVPAGGGELEAFVQPSVLQPLHLQERGALLGSRAWALSAGLPEHVAERELRRVHNRLELPREHLTPVQLDEQYGPGNVLLLEFAFEHLTELFSGFGQNSLRAEKVADVAIDQARAWLDSGAAVAEHLADQLLLPMALAGGGSFTTPCMTEHLESNIRVIEAFLPVRIEARSLGAHLLRMECHGLG*